RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TBC1D1Q86TI0 1168 aaPredicted RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 FJX1Q86VR8 437 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 ZC3HC1Q86WB0 502 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 ARID3BQ8IVW6 561 aaPredicted RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 PRR26Q8N8Z3 221 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 PPFIBP2Q8ND30 876 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 TRPC4APQ8TEL6 797 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 ADAMTS14Q8WXS8 1223 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 JAKMIP2Q96AA8 810 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 NSUN4Q96CB9 384 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 RTP4Q96DX8 246 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 RRNAD1Q96FB5 475 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 URB1-AS1Q96HZ7 61 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 APOLD1Q96LR9 279 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 C1orf74Q96LT6 269 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 DACH2Q96NX9 599 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 NUDT16L1Q9BRJ7 211 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 POLDIP3Q9BY77 421 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 NUF2Q9BZD4 464 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 NDST4Q9H3R1 872 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 C6orf106Q9H6K1 298 aaPredicted RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 KIF9Q9HAQ2 790 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 CLK4Q9HAZ1 481 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 MKKSQ9NPJ1 570 aaPredicted RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 GPR108Q9NPR9 543 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 HINT3Q9NQE9 182 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 SMARCAL1Q9NZC9 954 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 STK26Q9P289 416 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 RCOR1Q9UKL0 485 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 ACSL5Q9ULC5 683 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 NENFQ9UMX5 172 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 TTLL3Q9Y4R7 772 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 LSM4Q9Y4Z0 139 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 CEPT1Q9Y6K0 416 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 PASKQ96RG2 1323 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SCN5AQ14524 2016 aa2.15□□□□□ -2.06
CDC40-204ENST00000431461 FAM237AA0A1B0GTK4 181 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 DYTNA2CJ06 578 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 CPED1A4D0V7 1026 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 BECN2A8MW95 431 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 HSPA12AO43301 675 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 DDNO94850 711 aaPredicted RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 ITGAXP20702 1163 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 SP100P23497 879 aaPredicted RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 MCM3P25205 808 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 TM4SF1P30408 202 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 THPOP40225 353 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 IL15P40933 162 aaPredicted RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 PCYT1AP49585 367 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 CXCR3P49682 368 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 ART1P52961 327 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 CDH8P55286 799 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 TAS2R40P59535 323 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 GAGE2BQ13066 116 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 ACVR2BQ13705 512 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 SIM2Q14190 667 aaPredicted RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 CTTNQ14247 550 aaKnown RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 GAGE2EQ4V326 116 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 SLC45A4Q5BKX6 768 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 RILPL1Q5EBL4 403 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 SGO1Q5FBB7 561 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 GAGE2AQ6NT46 116 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 ZNF704Q6ZNC4 412 aaPredicted RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 PLEKHM3Q6ZWE6 761 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 MTSS1LQ765P7 747 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 DPPA4Q7L190 304 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 TDRPQ86YL5 185 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 DHX40Q8IX18 779 aaKnown RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 SLC35F3Q8IY50 421 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 TAGAPQ8N103 731 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 SPATA6LQ8N4H0 392 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 MCUQ8NE86 351 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 RDM1Q8NG50 284 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 TAAR8Q969N4 342 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 FAM120BQ96EK7 910 aaKnown RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 CMTM3Q96MX0 182 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 QRFPRQ96P65 431 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 SLX1AQ9BQ83 275 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 TTYH1Q9H313 450 aaPredicted RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 OSGEPL1Q9H4B0 414 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 PDZD7Q9H5P4 517 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 RANGRFQ9HD47 186 aaPredicted RBP2.15□□□□□ -2.07
CDC40-204ENST00000431461 CNGB3Q9NQW8 809 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 BLOC1S4Q9NUP1 217 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 GAGE2DQ9UEU5 116 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 VPS28Q9UK41 221 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 CDC14AQ9UNH5 594 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 VDAC3Q9Y277 283 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 AMDHD2Q9Y303 409 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 INSL5Q9Y5Q6 135 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 PTGDR2Q9Y5Y4 395 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 PSAT1Q9Y617 370 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 CAPN7Q9Y6W3 813 aa2.15□□□□□ -2.07
CDC40-204ENST00000431461 A0A1B0GVY2 172 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 A6NCN8 305 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 LRRC72A6NJI9 287 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ANKRD66B4E2M5 251 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 INAFM1C9JVW0 142 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 PTGES3LE9PB15 166 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 I6L893 689 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms