RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 RYKP34925 604 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 RFC1P35251 1148 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 AVPR1AP37288 418 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 CAPZA2P47755 286 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 STAT2P52630 851 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 SELENOVP59797 346 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 RBP5P82980 135 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 HYAL1Q12794 435 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 TFCP2Q12800 502 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 GPR18Q14330 331 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 VEPH1Q14D04 833 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 DLG2Q15700 870 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 DUSP6Q16828 381 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 IGSF11Q5DX21 431 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 C9orf152Q5JTZ5 239 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 DCAF12L2Q5VW00 463 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 LCTLQ6UWM7 567 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 MEPCEQ7L2J0 689 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 HAPLN4Q86UW8 402 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 TICAM1Q8IUC6 712 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 SLC35F3Q8IY50 421 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 CCDC170Q8IYT3 715 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 PELI3Q8N2H9 469 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 HORMAD2Q8N7B1 307 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 SYT2Q8N9I0 419 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 POMGNT2Q8NAT1 580 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 APPL2Q8NEU8 664 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 ENGASEQ8NFI3 743 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 OR4N2Q8NGD1 307 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 RASSF8Q8NHQ8 419 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 NOC3LQ8WTT2 800 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 SLC35F5Q8WV83 523 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 MRPS27Q92552 414 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 ATOH1Q92858 354 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 SECISBP2LQ93073 1101 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 RMDN1Q96DB5 314 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 ARHGEF26Q96DR7 871 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 NAA11Q9BSU3 229 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 IFIH1Q9BYX4 1025 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 C2orf40Q9H1Z8 148 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 MRPL44Q9H9J2 332 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 PLAC1Q9HBJ0 212 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 XAB2Q9HCS7 855 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 WDR6Q9NNW5 1121 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 DDX4Q9NQI0 724 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 SLC35C2Q9NQQ7 365 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 COQ3Q9NZJ6 369 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 DLGAP2Q9P1A6 1054 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 ANAPC5Q9UJX4 755 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 FZD10Q9ULW2 581 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 PLAGL1Q9UM63 463 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 MTMR6Q9Y217 621 aa3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 LSM4Q9Y4Z0 139 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 SRPRBQ9Y5M8 271 aaKnown RBP3.01□□□□□ -1.93
HMGB1P9-201ENST00000429856 FAM237AA0A1B0GTK4 181 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 TRBC2A0A5B9 178 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 OR6C75A6NL08 312 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 USP17L23D6RBM5 183 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 VWA5AO00534 786 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 HSPB6O14558 160 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 SEC14L5O43304 696 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 HCRTR2O43614 444 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 HS6ST1O60243 411 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 KLK8O60259 260 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 MITFO75030 526 aaPredicted RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 TBCAO75347 108 aaKnown RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 GOSR1O95249 250 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 FTCDO95954 541 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 IL1AP01583 271 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 ALPLP05186 524 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 MYBL1P10243 752 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 CALRP27797 417 aaKnown RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 CCR10P46092 362 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 THBS3P49746 956 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 LIG4P49917 911 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 NPY4RP50391 375 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 HTR6P50406 440 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 CLCN5P51795 746 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 CDH12P55289 794 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 ECT2LQ008S8 904 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 BFSP1Q12934 665 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 OLIG2Q13516 323 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 SNTB1Q13884 538 aaKnown RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 BAATQ14032 418 aaPredicted RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 NFE2L1Q14494 772 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 E2F5Q15329 346 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 PKN2Q16513 984 aaKnown RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 ODF3L2Q3SX64 289 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 SGO1Q5FBB7 561 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 TCP11X2Q5H9J9 407 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 DNTTIP2Q5QJE6 756 aaKnown RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 MPP7Q5T2T1 576 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 Q6ZTK2 550 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 SEPT14Q6ZU15 432 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 USP43Q70EL4 1123 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 ZSCAN30Q86W11 494 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 PALB2Q86YC2 1186 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms