RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ZNF423Q2M1K9 1284 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 AP5B1Q2VPB7 878 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 EGFLAMQ63HQ2 1017 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 FAM117BQ6P1L5 589 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ZNF534Q76KX8 674 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 OR13C4Q8NGS5 318 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SLC13A4Q9UKG4 626 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 TNPO3Q9Y5L0 923 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ZCWPW2A0A1B0GU75 182 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 G3V2T6 193 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 DCLK1O15075 740 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 IRAK2O43187 625 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 CYBBP04839 570 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 MC4RP32245 332 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 TTPAP49638 278 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 MTPNP58546 118 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SULT2A1Q06520 285 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 PPP1R8Q12972 351 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 CSTF3Q12996 717 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 CHSY3Q70JA7 882 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 UTS2BQ765I0 119 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ANKRD23Q86SG2 305 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SETD9Q8NE22 299 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 USE1Q9NZ43 259 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 GMIPQ9P107 970 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 MAGEL2Q9UJ55 1249 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 KCTD3Q9Y597 815 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 NUMBLQ9Y6R0 609 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 KLHL33A6NCF5 533 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ARPC2O15144 300 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 RECQL5O94762 991 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ABCB1P08183 1280 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 THRBP10828 461 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 LPOP22079 712 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 CAPGP40121 348 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 MAGEA6P43360 314 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 SOX4Q06945 474 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 BNIP3Q12983 259 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 PIGGQ5H8A4 983 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 XKR5Q6UX68 686 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 HM13Q8TCT9 377 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 KCNA7Q96RP8 456 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 PALMDQ9NP74 551 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 TRNAU1APQ9NX07 287 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 MTMR10Q9NXD2 777 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 GDAP2Q9NXN4 497 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ARL5AQ9Y689 179 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 MBL2P11226 248 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 HCAR3P49019 387 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 EPS8Q12929 822 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 RABL3Q5HYI8 236 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 CRTC3Q6UUV7 619 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 CHST15Q7LFX5 561 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 SPATA19Q7Z5L4 167 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 HEATR4Q86WZ0 1026 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 TMEM132CQ8N3T6 1108 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 PHC3Q8NDX5 983 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ACVR1CQ8NER5 493 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 KCTD13Q8WZ19 329 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 LRRC58Q96CX6 371 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 FBXL20Q96IG2 436 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 FAM126AQ9BYI3 521 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 CRTAC1Q9NQ79 661 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 TRPM5Q9NZQ8 1165 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 EIF2B4Q9UI10 523 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 GIT1Q9Y2X7 761 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 CCDC162PA2VCL2 907 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ATP6V1G1O75348 118 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 NTRK1P04629 796 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 GSNP06396 782 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 PKMP14618 531 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 CTPS1P17812 591 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ENTPD1P49961 510 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 HERVK_113P63132 956 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ECT2LQ008S8 904 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 BOP1Q14137 746 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 SIM2Q14190 667 aaPredicted RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 THAP5Q7Z6K1 395 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 GALNT5Q7Z7M9 940 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 PROSER1Q86XN7 944 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 NAT16Q8N8M0 369 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 SPPL2BQ8TCT7 592 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 IRGQQ8WZA9 623 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 FAM210AQ96ND0 272 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 APOL4Q9BPW4 351 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ERVK-6Q9BXR3 956 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 EPS8L2Q9H6S3 715 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ASB8Q9H765 288 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 DNAAF2Q9NVR5 837 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 ARL15Q9NXU5 204 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 LSM7Q9UK45 103 aaKnown RBP12.58□□□□□ -0.4
CPNE4-201ENST00000429747 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.4
CPNE4-201ENST00000429747 LOC100506127A0A0U1RQW1 187 aa12.57□□□□□ -0.4
CPNE4-201ENST00000429747 SYNDIG1LA6NDD5 238 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms