RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CHKBQ9Y259 395 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 PPIL1Q9Y3C6 166 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 PCDHGA3Q9Y5H0 932 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 OAS3Q9Y6K5 1087 aaKnown RBP16.45■□□□□ 0.22
VARS-216ENST00000428445 RELNP78509 3460 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 PSMD11O00231 422 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 DUX1O43812 170 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 FZD6O60353 706 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 CLDN7O95471 211 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 SFTPCP11686 197 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 IL4RP24394 825 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 NFKBIAP25963 317 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 PCK1P35558 622 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 HSPA9P38646 679 aaKnown RBP16.44■□□□□ 0.22
VARS-216ENST00000428445 POLE2P56282 527 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 DSC2Q02487 901 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 KLHL30Q0D2K2 578 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 NFATC2Q13469 925 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 TRA2AQ13595 282 aaKnown RBP eCLIP16.44■□□□□ 0.22
VARS-216ENST00000428445 ATP13A4Q4VNC1 1196 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 BORAQ6PGQ7 559 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 ADAMTSL4Q6UY14 1074 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 USP45Q70EL2 814 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 CHST15Q7LFX5 561 aaPredicted RBP16.44■□□□□ 0.22
VARS-216ENST00000428445 BMPERQ8N8U9 685 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 AHCYL2Q96HN2 611 aaKnown RBP16.44■□□□□ 0.22
VARS-216ENST00000428445 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
VARS-216ENST00000428445 SLC38A3Q99624 504 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 NAT10Q9H0A0 1025 aaKnown RBP16.44■□□□□ 0.22
VARS-216ENST00000428445 CDH19Q9H159 772 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 APMAPQ9HDC9 416 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 AIPL1Q9NZN9 384 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 KLHL3Q9UH77 587 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 UBR5O95071 2799 aaPredicted RBP16.44■□□□□ 0.22
VARS-216ENST00000428445 DOPEY2Q9Y3R5 2298 aa16.44■□□□□ 0.22
VARS-216ENST00000428445 LOC101059948A0A1B0GTJ6 334 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 ZW10O43264 779 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 PRKAR1AP10644 381 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 TEAD1P28347 426 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 MAPK9P45984 424 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 SQSTM1Q13501 440 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 IGFBP7Q16270 282 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 BOLA3Q53S33 107 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 ZNF648Q5T619 568 aaPredicted RBP16.43■□□□□ 0.22
VARS-216ENST00000428445 TIPARPQ7Z3E1 657 aaKnown RBP16.43■□□□□ 0.22
VARS-216ENST00000428445 BBS5Q8N3I7 341 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 TEX26Q8N6G2 289 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 NSMCE1Q8WV22 266 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 NCSTNQ92542 709 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 COX14Q96I36 57 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 WDR24Q96S15 920 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 DDA1Q9BW61 102 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 ARFGAP3Q9NP61 516 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 ZNF71Q9NQZ8 489 aaPredicted RBP16.43■□□□□ 0.22
VARS-216ENST00000428445 TBC1D29Q9UFV1 150 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 PILRAQ9UKJ1 303 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 CNOT6Q9ULM6 557 aaKnown RBP16.43■□□□□ 0.22
VARS-216ENST00000428445 KCNK6Q9Y257 313 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 SCINQ9Y6U3 715 aa16.43■□□□□ 0.22
VARS-216ENST00000428445 A0A0J9YYE9 177 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 MFSD11O43934 449 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 SNX2O60749 519 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 DNAJC6O75061 913 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 PRLP01236 227 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 TRBC1P01850 177 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 PRKCIP41743 596 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 STC1P52823 247 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 CDH6P55285 790 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 SLC25A11Q02978 314 aaKnown RBP16.42■□□□□ 0.22
VARS-216ENST00000428445 TYRO3Q06418 890 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 KCNAB2Q13303 367 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 CLPPQ16740 277 aaPredicted RBP16.42■□□□□ 0.22
VARS-216ENST00000428445 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.42■□□□□ 0.22
VARS-216ENST00000428445 DCAF12Q5T6F0 453 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 ATP1A1-AS1Q5TC04 95 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 GALNT13Q8IUC8 556 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 SFRP1Q8N474 314 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 RTP4Q96DX8 246 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 SPRY4Q9C004 299 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 THAP2Q9H0W7 228 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 ISCUQ9H1K1 167 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 EPN3Q9H201 632 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 MRPL47Q9HD33 250 aaKnown RBP16.42■□□□□ 0.22
VARS-216ENST00000428445 TTLL3Q9Y4R7 772 aa16.42■□□□□ 0.22
VARS-216ENST00000428445 SMTNL1A8MU46 457 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 FADS2P1A8MWK0 482 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 B4E171 279 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 MBD3O95983 291 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 MYBL1P10243 752 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 GJC1P36383 396 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 TSPAN7P41732 249 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 SSR1P43307 286 aaKnown RBP16.41■□□□□ 0.22
VARS-216ENST00000428445 FASLGP48023 281 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 EPHB1P54762 984 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 HHEXQ03014 270 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 SRSF1Q07955 248 aaKnown RBP eCLIP16.41■□□□□ 0.22
VARS-216ENST00000428445 NIPAL4Q0D2K0 466 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 KRT81Q14533 505 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 ANO6Q4KMQ2 910 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 FILIP1LQ4L180 1135 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms