RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 FGF10O15520 208 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 RLN1P04808 185 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 BNC1Q01954 994 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 TAF13Q15543 124 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 CLEC6AQ6EIG7 209 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 AFTPHQ6ULP2 937 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 GPR65Q8IYL9 337 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 MEIOBQ8N635 442 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 GRIN3AQ8TCU5 1115 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 HELQQ8TDG4 1101 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 ALG2Q9H553 416 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 VPS51Q9UID3 782 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 MAPRE3Q9UPY8 281 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 VWA7Q9Y334 891 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 PPP1R11O60927 126 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 BUD31P41223 144 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 NEK5Q6P3R8 708 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 R3HCC1LQ7Z5L2 792 aaKnown RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 LENG9Q96B70 501 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 ZCCHC2Q9C0B9 1178 aaKnown RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 TRPV5Q9NQA5 729 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 TIMM22Q9Y584 194 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 MAFO75444 373 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 S100A6P06703 90 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 THRBP10828 461 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 RPS9P46781 194 aaKnown RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 GNA13Q14344 377 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 KCNA10Q16322 511 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 UGCGQ16739 394 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 POM121L1PQ3SYA9 428 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 SETMARQ53H47 684 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 ANKRD22Q5VYY1 191 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 HLA-DQA1Q5Y7H0 255 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 KCTD8Q6ZWB6 473 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 ITIH5Q86UX2 942 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 CPSF7Q8N684 471 aaKnown RBP14.45□□□□□ -0.1
PTPRU-204ENST00000428026 TEX47Q8TBZ9 253 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 TOP1MTQ969P6 601 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 KREMEN1Q96MU8 473 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 C7orf26Q96N11 449 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 TSSK3Q96PN8 268 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF232Q9UNY5 417 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 MATN2O00339 956 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 ICAM3P32942 547 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 CTNNB1P35222 781 aa14.45□□□□□ -0.1
PTPRU-204ENST00000428026 UGT2B11O75310 529 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ANGPTL1O95841 491 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 DHFRP00374 187 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ASGR1P07306 291 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 NCK1P16333 377 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 MXD1Q05195 221 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 REP15Q6BDI9 236 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 PGAM4Q8N0Y7 254 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 DCBLD1Q8N8Z6 715 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 SLAIN1Q8ND83 568 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 BRI3BPQ8WY22 251 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CPT1BQ92523 772 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TAMM41Q96BW9 452 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 NXNL1Q96CM4 212 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 DNAJC28Q9NX36 388 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CYP3A7-CYP3A51PA0A087WV96 503 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 FAM172BPA6NC97 362 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TRAFD1O14545 582 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ECDO95905 644 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ERBB2P04626 1255 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CYP3A7P24462 503 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TTPAP49638 278 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 HSF2Q03933 536 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 PITRM1Q5JRX3 1037 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 STX12Q86Y82 276 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 PPTC7Q8NI37 304 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 VANGL1Q8TAA9 524 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CD101Q93033 1021 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TLCD1Q96CP7 247 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 C11orf24Q96F05 449 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-204ENST00000428026 BTBD9Q96Q07 612 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 PCDH18Q9HCL0 1135 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 GIN1Q9NXP7 522 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 NDOR1Q9UHB4 597 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 NPEPPSL1A6NEC2 478 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 H3BNX3 289 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TSPAN4O14817 238 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 SGTAO43765 313 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CTPS1P17812 591 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ACSBG2Q5FVE4 666 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CDK5RAP1Q96SZ6 601 aaKnown RBP14.44□□□□□ -0.1
PTPRU-204ENST00000428026 FEM1AQ9BSK4 669 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TMPRSS4Q9NRS4 437 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 SQORQ9Y6N5 450 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 BBIP1A8MTZ0 92 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ARHGEF33A8MVX0 844 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CLDN5O00501 218 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 MMP3P08254 477 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ABRQ12979 859 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 PPM1LQ5SGD2 360 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 CCDC185Q8N715 623 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 OR4A15Q8NGL6 344 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF558Q96NG5 402 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms