RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LATS2Q9NRM7 1088 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 AASSQ9UDR5 926 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 HS3ST4Q9Y661 456 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 C5orf42Q9H799 3197 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 TOR1BO14657 336 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 CNPP09543 421 aaKnown RBP13.34□□□□□ -0.27
USP42-203ENST00000426246 PSMA4P25789 261 aaKnown RBP13.34□□□□□ -0.27
USP42-203ENST00000426246 KCNK10P57789 538 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 TRAF2Q12933 501 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 LRRC73Q5JTD7 316 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 FAM171A1Q5VUB5 890 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 ANGPTL8Q6UXH0 198 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 FAM126BQ8IXS8 530 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 TWIST2Q8WVJ9 160 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 UNC93B1Q9H1C4 597 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.34□□□□□ -0.27
USP42-203ENST00000426246 COMMD3-BMI1R4GMX3 469 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 C1orf232A0A0U1RR37 186 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 OR1I1O60431 355 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 SYNCRIPO60506 623 aaKnown RBP13.34□□□□□ -0.27
USP42-203ENST00000426246 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
USP42-203ENST00000426246 OXTRP30559 389 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 KCNQ1P51787 676 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 GALNT2Q10471 571 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 DDX39BQ13838 428 aaKnown RBP13.34□□□□□ -0.27
USP42-203ENST00000426246 SPOUT1Q5T280 376 aaKnown RBP13.34□□□□□ -0.27
USP42-203ENST00000426246 GPR141Q7Z602 305 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 ZNF280BQ86YH2 543 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 EBF1Q9UH73 591 aa13.34□□□□□ -0.27
USP42-203ENST00000426246 VWA8A3KMH1 1905 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 DHRS12A0PJE2 317 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 CCDC162PA2VCL2 907 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 NIPSNAP2O75323 286 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 MAGP20916 626 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.27
USP42-203ENST00000426246 GDF5P43026 501 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 MAGEA6P43360 314 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 RPS24P62847 133 aaKnown RBP13.33□□□□□ -0.27
USP42-203ENST00000426246 SH3BP2P78314 561 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 DGCR6Q14129 220 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 NR6A1Q15406 480 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 PTERQ96BW5 349 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 GPR21Q99679 349 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 KCTD14Q9BQ13 255 aaPredicted RBP13.33□□□□□ -0.27
USP42-203ENST00000426246 ENTPD7Q9NQZ7 604 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 VTI1BQ9UEU0 232 aa13.33□□□□□ -0.27
USP42-203ENST00000426246 NOBOXO60393 691 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 TLR5O60602 858 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 MAFKO60675 156 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 NBNO60934 754 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 CYP4B1P13584 511 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 ARNTP27540 789 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 NDST2P52849 883 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 POU4F1Q01851 419 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 TCTN1Q2MV58 587 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 DCLRE1AQ6PJP8 1040 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 CHSY3Q70JA7 882 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 SETD3Q86TU7 594 aaPredicted RBP13.33□□□□□ -0.28
USP42-203ENST00000426246 SIKE1Q9BRV8 207 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 C17orf80Q9BSJ5 609 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 MUC3BQ9H195 1237 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 RRN3Q9NYV6 651 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 PRPF19Q9UMS4 504 aaKnown RBP13.33□□□□□ -0.28
USP42-203ENST00000426246 MYO1GB0I1T2 1018 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 FBP2O00757 339 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 UBFD1O14562 309 aaKnown RBP13.33□□□□□ -0.28
USP42-203ENST00000426246 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
USP42-203ENST00000426246 RENBPP51606 427 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 CASP9P55211 416 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 BFSP2Q13515 415 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 IKBKEQ14164 716 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 CRIPAKQ8N1N5 446 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 ITCHQ96J02 903 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 HGH1Q9BTY7 390 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 SLC25A23Q9BV35 468 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 EIF2B3Q9NR50 452 aaKnown RBP13.33□□□□□ -0.28
USP42-203ENST00000426246 TRIM17Q9Y577 477 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 ZNF638Q14966 1978 aaKnown RBP13.33□□□□□ -0.28
USP42-203ENST00000426246 XIRP2A4UGR9 3374 aa13.33□□□□□ -0.28
USP42-203ENST00000426246 M0QZQ0 153 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 LRATO95237 230 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 PRKACGP22612 351 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 ENTPD1P49961 510 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 TAF10Q12962 218 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 GTF2H3Q13889 308 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 CTXN3Q4LDR2 81 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 SIRPB2Q5JXA9 342 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 METTL21CQ5VZV1 264 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 IL27RAQ6UWB1 636 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 BNIPLQ7Z465 357 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 RETREG3Q86VR2 466 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 TMEM86AQ8N2M4 240 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 STN1Q9H668 368 aaKnown RBP13.32□□□□□ -0.28
USP42-203ENST00000426246 PCDH12Q9NPG4 1184 aa13.32□□□□□ -0.28
USP42-203ENST00000426246 GKN1Q9NS71 199 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms