RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TAAR8Q969N4 342 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 COG8Q96MW5 612 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 ERVK-11Q9UQG0 969 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 GOLGA6L10A0A0M3HER8 536 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 ZCWPW2A0A1B0GU75 182 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 SORBS2O94875 1100 aaKnown RBP4.35□□□□□ -1.71
LINC01040-201ENST00000425048 TFP02787 698 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 GALTP07902 379 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 IRF1P10914 325 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF23P17027 643 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 GPD2P43304 727 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 CSNK2A1P68400 391 aaPredicted RBP4.35□□□□□ -1.71
LINC01040-201ENST00000425048 EFNB1P98172 346 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 SORDQ00796 357 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 FOXM1Q08050 763 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 SYCP2LQ5T4T6 812 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 RBMS3Q6XE24 437 aaKnown RBP4.35□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF704Q6ZNC4 412 aaPredicted RBP4.35□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF440Q8IYI8 595 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 CSNK2A3Q8NEV1 391 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 ARHGEF26Q96DR7 871 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 C2orf42Q9NWW7 574 aa4.35□□□□□ -1.71
LINC01040-201ENST00000425048 HOXA13P31271 388 aaPredicted RBP4.34□□□□□ -1.71
LINC01040-201ENST00000425048 KRT9P35527 623 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 FASLGP48023 281 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 ARCN1P48444 511 aaKnown RBP4.34□□□□□ -1.71
LINC01040-201ENST00000425048 FOXD4Q12950 439 aaPredicted RBP4.34□□□□□ -1.71
LINC01040-201ENST00000425048 TMEM187Q14656 261 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 WDR45BQ5MNZ6 344 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.34□□□□□ -1.71
LINC01040-201ENST00000425048 TDRPQ86YL5 185 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 PLD5Q8N7P1 536 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 OR5R1Q8NH85 324 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF473Q8WTR7 871 aaKnown RBP4.34□□□□□ -1.71
LINC01040-201ENST00000425048 ORAI1Q96D31 301 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 POM121L2Q96KW2 1035 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 FAM110AQ9BQ89 295 aa4.34□□□□□ -1.71
LINC01040-201ENST00000425048 BICC1Q9H694 974 aaKnown RBP4.34□□□□□ -1.71
LINC01040-201ENST00000425048 INTS10Q9NVR2 710 aaKnown RBP4.34□□□□□ -1.71
LINC01040-201ENST00000425048 NCAM2O15394 837 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 SPINT2O43291 252 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 CHKAP35790 457 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 PAPOLAP51003 745 aaKnown RBP4.33□□□□□ -1.72
LINC01040-201ENST00000425048 NAE1Q13564 534 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 FRG2Q64ET8 278 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 ZNF790Q6PG37 636 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 C2CD5Q86YS7 1000 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 VPS37AQ8NEZ2 397 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 SLC41A2Q96JW4 573 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 MPHOSPH8Q99549 860 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 FGF22Q9HCT0 170 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 RPS10P5Q9NQ39 176 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 DAAM1Q9Y4D1 1078 aa4.33□□□□□ -1.72
LINC01040-201ENST00000425048 A0A087X002 238 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 H7C423 109 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 TCERG1O14776 1098 aaKnown RBP4.32□□□□□ -1.72
LINC01040-201ENST00000425048 SEC14L5O43304 696 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 TACC1O75410 805 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 DPEP1P16444 411 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 AHRP35869 848 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 PLIN5Q00G26 463 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 ZNF239Q16600 458 aaKnown RBP4.32□□□□□ -1.72
LINC01040-201ENST00000425048 ZC2HC1CQ53FD0 456 aaPredicted RBP4.32□□□□□ -1.72
LINC01040-201ENST00000425048 TXNDC8Q6A555 127 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 TMEM81Q6P7N7 255 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 METTL7BQ6UX53 244 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 PLEKHM3Q6ZWE6 761 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 P2RY8Q86VZ1 359 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 MYCT1Q8N699 235 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 DDHD1Q8NEL9 900 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 THAP6Q8TBB0 222 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 REEP2Q9BRK0 252 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 TCP11L1Q9NUJ3 509 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 ADPRHL2Q9NX46 363 aa4.32□□□□□ -1.72
LINC01040-201ENST00000425048 COL5A2P05997 1499 aaPredicted RBP4.31□□□□□ -1.72
LINC01040-201ENST00000425048 hCG_1642624A0A1W2PR95 340 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 CLIC2O15247 247 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 EIF3DO15371 548 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC01040-201ENST00000425048 EGFP01133 1207 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 URODP06132 367 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 TAS2R38P59533 333 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 MRPS5P82675 430 aaKnown RBP4.31□□□□□ -1.72
LINC01040-201ENST00000425048 RNPS1Q15287 305 aaKnown RBP4.31□□□□□ -1.72
LINC01040-201ENST00000425048 PDCD2Q16342 344 aaPredicted RBP4.31□□□□□ -1.72
LINC01040-201ENST00000425048 SIGIRRQ6IA17 410 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 RAD9BQ6WBX8 426 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 GPR180Q86V85 440 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 MAP7D3Q8IWC1 876 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 ANKRD52Q8NB46 1076 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 HMGCLL1Q8TB92 370 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 SLC38A5Q8WUX1 472 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 PHF7Q9BWX1 381 aaPredicted RBP4.31□□□□□ -1.72
LINC01040-201ENST00000425048 HEMGNQ9BXL5 484 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 C20orf141Q9NUB4 165 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 RASAL2Q9UJF2 1139 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 KLHL20Q9Y2M5 609 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 MRPS28Q9Y2Q9 187 aaKnown RBP4.31□□□□□ -1.72
LINC01040-201ENST00000425048 RIPOR2Q9Y4F9 1068 aa4.31□□□□□ -1.72
LINC01040-201ENST00000425048 KIAA1210Q9ULL0 1709 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms