RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TRAM1L1Q8N609 369 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 OR56A4Q8NGH8 313 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 BTN2A2Q8WVV5 523 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 IL26Q9NPH9 171 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 CASS4Q9NQ75 786 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 DNAJC28Q9NX36 388 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 PCOLCE2Q9UKZ9 415 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 SLC17A4Q9Y2C5 497 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 BTBD3Q9Y2F9 522 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 PLXNB3Q9ULL4 1909 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 GOLGA6L10A0A0M3HER8 536 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 APRTP07741 180 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 CEACAM1P13688 526 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 JUNDP17535 347 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 GRIA1P42261 906 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 BLKP51451 505 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 SRP54P61011 504 aaKnown RBP18.35■□□□□ 0.53
HDAC6-205ENST00000423941 IL9RQ01113 521 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 PPARDQ03181 441 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 GLRX5Q86SX6 157 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 GATAD2AQ86YP4 633 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 NAXDQ8IW45 347 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 PHACTR4Q8IZ21 702 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 OR1E3Q8WZA6 343 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 HIC2Q96JB3 615 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 ZSCAN5AQ9BUG6 496 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 TCEAL2Q9H3H9 227 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-205ENST00000423941 FGF22Q9HCT0 170 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 UCKL1Q9NWZ5 548 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 TMPRSS11EQ9UL52 423 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 ARL5AQ9Y689 179 aa18.35■□□□□ 0.53
HDAC6-205ENST00000423941 MROH6A6NGR9 719 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 C2orf81A6NN90 581 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 SCAMP1O15126 338 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 RASGRP1O95267 797 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 CRTAMO95727 393 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 KRT14P02533 472 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 CASQ1P31415 396 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 PTGIRP43119 386 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 GRK6P43250 576 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 ZNF140P52738 457 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-205ENST00000423941 PDE1BQ01064 536 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 CDH17Q12864 832 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 SDR16C5Q8N3Y7 309 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 OR52K1Q8NGK4 314 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 GRK7Q8WTQ7 553 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 TSACCQ96A04 125 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-205ENST00000423941 CAPZA3Q96KX2 299 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 CAMK1GQ96NX5 476 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 VPS35Q96QK1 796 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 BPIFA1Q9NP55 256 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 PKP3Q9Y446 797 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 KCTD3Q9Y597 815 aa18.34■□□□□ 0.53
HDAC6-205ENST00000423941 PRSS38A1L453 326 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 DCDC2BA2VCK2 349 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 AGAP14A8MT82 685 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 H3BM21 787 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 H7C0S8 307 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 BUD23O43709 281 aaKnown RBP18.33■□□□□ 0.52
HDAC6-205ENST00000423941 IVLP07476 585 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 TPH1P17752 444 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 TPSB2P20231 275 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 XIAPP98170 497 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 KCNJ11Q14654 390 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 PTPRCAPQ14761 206 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 TPSAB1Q15661 275 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 RBFAQ8N0V3 343 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 ZNF548Q8NEK5 533 aaPredicted RBP18.33■□□□□ 0.52
HDAC6-205ENST00000423941 PDXPQ96GD0 296 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 RANBP9Q96S59 729 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 LRRC61Q9BV99 259 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 CLPBQ9H078 707 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 DDX47Q9H0S4 455 aaKnown RBP18.33■□□□□ 0.52
HDAC6-205ENST00000423941 VPS18Q9P253 973 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 KLQ9UEF7 1012 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 APOBEC3BQ9UH17 382 aaKnown RBP18.33■□□□□ 0.52
HDAC6-205ENST00000423941 RIMKLBQ9ULI2 386 aa18.33■□□□□ 0.52
HDAC6-205ENST00000423941 E7EVH7 732 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 CCDC188H7C350 402 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 TPP1O14773 563 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 STX7O15400 261 aaKnown RBP18.32■□□□□ 0.52
HDAC6-205ENST00000423941 AQP9O43315 295 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 SDC3O75056 442 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 KCNK5O95279 499 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 TNFP01375 233 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 SPAM1P38567 509 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 PAFAH1B1P43034 410 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 GPS1Q13098 491 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 TRIP13Q15645 432 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-205ENST00000423941 KCTD19Q17RG1 926 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-205ENST00000423941 ATP13A5Q4VNC0 1218 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 HID1Q8IV36 788 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 OR4K2Q8NGD2 314 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 OR4C6Q8NH72 309 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 RHBDD1Q8TEB9 315 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 PTCD2Q8WV60 388 aaKnown RBP18.32■□□□□ 0.52
HDAC6-205ENST00000423941 GLYATL1Q969I3 302 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 SPATA16Q9BXB7 569 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 SLC13A1Q9BZW2 595 aa18.32■□□□□ 0.52
HDAC6-205ENST00000423941 MRPL40Q9NQ50 206 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms