RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 GSDMCQ9BYG8 508 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 GOLPH3Q9H4A6 298 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 HAUS2Q9NVX0 235 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 TRNAU1APQ9NX07 287 aaKnown RBP15.12■□□□□ 0.01
USB1-202ENST00000423271 TAAR2Q9P1P5 351 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 LRIT1Q9P2V4 623 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 APPL1Q9UKG1 709 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 ATXN7L1Q9ULK2 861 aaPredicted RBP15.12■□□□□ 0.01
USB1-202ENST00000423271 PLEKHM1Q9Y4G2 1056 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 PCDHGA8Q9Y5G5 932 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 ADGRG1Q9Y653 693 aa15.12■□□□□ 0.01
USB1-202ENST00000423271 INPP4BO15327 924 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 SPOPO43791 374 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 TNFSF15O95150 251 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 FGF1P05230 155 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 IVLP07476 585 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 CA4P22748 312 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 RBMS1P29558 406 aaKnown RBP15.11■□□□□ 0.01
USB1-202ENST00000423271 ADCY8P40145 1251 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 SLC1A1P43005 524 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 RPL26P61254 145 aaKnown RBP15.11■□□□□ 0.01
USB1-202ENST00000423271 CTBSQ01459 385 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 AP1B1Q10567 949 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 GALNT3Q14435 633 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 LRRC38Q5VT99 294 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 MFSD7Q6UXD7 560 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 MARK2Q7KZI7 788 aaKnown RBP15.11■□□□□ 0.01
USB1-202ENST00000423271 TMPRSS9Q7Z410 1059 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 VSIG1Q86XK7 387 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 RFX6Q8HWS3 928 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 KIAA1524Q8TCG1 905 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 ZDHHC1Q8WTX9 485 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 KCNE4Q8WWG9 221 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 LIN37Q96GY3 246 aaPredicted RBP15.11■□□□□ 0.01
USB1-202ENST00000423271 PDLIM2Q96JY6 352 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 WDR24Q96S15 920 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 LYSMD1Q96S90 227 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 BRD8Q9H0E9 1235 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 SEPT10Q9P0V9 454 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 RPL26L1Q9UNX3 145 aaKnown RBP15.11■□□□□ 0.01
USB1-202ENST00000423271 PCYT1BQ9Y5K3 369 aaPredicted RBP15.11■□□□□ 0.01
USB1-202ENST00000423271 ALG6Q9Y672 507 aa15.11■□□□□ 0.01
USB1-202ENST00000423271 ZFC3H1O60293 1989 aaKnown RBP15.11■□□□□ 0.01
USB1-202ENST00000423271 C1orf232A0A0U1RR37 186 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 CDRT15L2A8MXV6 281 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 AGRPO00253 132 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 NUDT21O43809 227 aaKnown RBP15.1■□□□□ 0.01
USB1-202ENST00000423271 ECEL1O95672 775 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 HGFP14210 728 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 PNLIPP16233 465 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 INHBCP55103 352 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 NAP1L1P55209 391 aaKnown RBP15.1■□□□□ 0.01
USB1-202ENST00000423271 KIF5AQ12840 1032 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 PDK1Q15118 436 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 LLGL1Q15334 1064 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 C11orf63Q6NUN7 778 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 C17orf82Q86X59 251 aaPredicted RBP15.1■□□□□ 0.01
USB1-202ENST00000423271 RHOT1Q8IXI2 618 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 NRSN1Q8IZ57 195 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 TXLNBQ8N3L3 684 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 SCARF2Q96GP6 870 aaPredicted RBP15.1■□□□□ 0.01
USB1-202ENST00000423271 COX14Q96I36 57 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 AGAP3Q96P47 875 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 OR2M4Q96R27 311 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 MAK16Q9BXY0 300 aaKnown RBP15.1■□□□□ 0.01
USB1-202ENST00000423271 DNPEPQ9ULA0 475 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 OAS3Q9Y6K5 1087 aaKnown RBP15.1■□□□□ 0.01
USB1-202ENST00000423271 SCN8AQ9UQD0 1980 aa15.1■□□□□ 0.01
USB1-202ENST00000423271 BAHCC1Q9P281 2608 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 MACROD2A1Z1Q3 448 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 PLD2O14939 933 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 CCKBRP32239 447 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 ACTR1BP42025 376 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 OR1D5P58170 312 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 ACTR1AP61163 376 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 CXADRP78310 365 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 B4GALNT1Q00973 533 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 COL9A2Q14055 689 aaPredicted RBP15.09■□□□□ 0.01
USB1-202ENST00000423271 RAB11FIP2Q7L804 512 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 LYSMD3Q7Z3D4 306 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 KDELC2Q7Z4H8 507 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 CLEC14AQ86T13 490 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 DAAM2Q86T65 1068 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 NLRP8Q86W28 1048 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 NAGSQ8N159 534 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 ARL14Q8N4G2 192 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 CALR3Q96L12 384 aaKnown RBP15.09■□□□□ 0.01
USB1-202ENST00000423271 TRIB3Q96RU7 358 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 MLPHQ9BV36 600 aaPredicted RBP15.09■□□□□ 0.01
USB1-202ENST00000423271 STRADBQ9C0K7 418 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 CDH19Q9H159 772 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 CPNE5Q9HCH3 593 aa15.09■□□□□ 0.01
USB1-202ENST00000423271 DDX56Q9NY93 547 aaKnown RBP15.09■□□□□ 0.01
USB1-202ENST00000423271 SAE1Q9UBE0 346 aaPredicted RBP15.09■□□□□ 0.01
USB1-202ENST00000423271 CNOT6Q9ULM6 557 aaKnown RBP15.09■□□□□ 0.01
USB1-202ENST00000423271 GRID2IPA4D2P6 1211 aa15.08■□□□□ 0
USB1-202ENST00000423271 FADS2P1A8MWK0 482 aa15.08■□□□□ 0
USB1-202ENST00000423271 ANKRD66B4E2M5 251 aa15.08■□□□□ 0
USB1-202ENST00000423271 PPP1R12AO14974 1030 aaPredicted RBP15.08■□□□□ 0
USB1-202ENST00000423271 KLK10O43240 276 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms