RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 IL2P60568 153 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 CCT2P78371 535 aaKnown RBP5.09□□□□□ -1.59
SFXN1-202ENST00000421887 SLC7A9P82251 487 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 SAFBQ15424 915 aaKnown RBP eCLIP5.09□□□□□ -1.59
SFXN1-202ENST00000421887 TERF2Q15554 542 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 C9orf57Q5W0N0 161 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 WSCD1Q658N2 575 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 Q6ZVL8 140 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 CATSPER3Q86XQ3 398 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 CACUL1Q86Y37 369 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 DCBLD1Q8N8Z6 715 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 EXD3Q8N9H8 876 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 COG1Q8WTW3 980 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 UCMAQ8WVF2 138 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 VCPIP1Q96JH7 1222 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 ACOX2Q99424 681 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 MYOCQ99972 504 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 NACA2Q9H009 215 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 LSG1Q9H089 658 aaKnown RBP5.09□□□□□ -1.59
SFXN1-202ENST00000421887 CDH19Q9H159 772 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 ABCG4Q9H172 646 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 POLR1BQ9H9Y6 1135 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 POLD4Q9HCU8 107 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 TM9SF3Q9HD45 589 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 SPHK2Q9NRA0 654 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 SPTLC3Q9NUV7 552 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 INTS13Q9NVM9 706 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 GOLGA6AQ9NYA3 693 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 ORC3Q9UBD5 711 aaPredicted RBP5.09□□□□□ -1.59
SFXN1-202ENST00000421887 ZNF180Q9UJW8 692 aa5.09□□□□□ -1.59
SFXN1-202ENST00000421887 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.09□□□□□ -1.59
SFXN1-202ENST00000421887 TTC26A0AVF1 554 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 LACTBL1A8MY62 500 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 KPNA7A9QM74 516 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 KCNJ18B7U540 433 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 WASH3PC4AMC7 463 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 NEDD8-MDP1E9PL57 170 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 NPC1O15118 1278 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 HOXC11O43248 304 aaPredicted RBP5.08□□□□□ -1.6
SFXN1-202ENST00000421887 NEMFO60524 1076 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 BPIP17213 487 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ELAVL4P26378 380 aaKnown RBP5.08□□□□□ -1.6
SFXN1-202ENST00000421887 CD27P26842 260 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 CDH8P55286 799 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ZXDBP98169 803 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ST3GAL1Q11201 340 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 TMEM132DQ14C87 1099 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 MLC1Q15049 377 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 BRD3Q15059 726 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 PTPRRQ15256 657 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ZBTB6Q15916 424 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ARL13BQ3SXY8 428 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 FUT11Q495W5 492 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 SLC45A4Q5BKX6 768 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 SPATA1Q5VX52 437 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 HAUS3Q68CZ6 603 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 SLC18B1Q6NT16 456 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 SLC2A7Q6PXP3 512 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 LAYNQ6UX15 382 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ZNF66Q6ZN08 573 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 C4orf50Q6ZRC1 276 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 DENND5BQ6ZUT9 1274 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ZDHHC17Q8IUH5 632 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 CD302Q8IX05 232 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 PQLC1Q8N2U9 271 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 FITM2Q8N6M3 262 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 RFFLQ8WZ73 363 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 HPS3Q969F9 1004 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 HMCESQ96FZ2 354 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ZBTB45Q96K62 511 aaPredicted RBP5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ZNF560Q96MR9 790 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 SLITRK1Q96PX8 696 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 CCNL2Q96S94 520 aaPredicted RBP5.08□□□□□ -1.6
SFXN1-202ENST00000421887 ACBD6Q9BR61 282 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 BBS2Q9BXC9 721 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 BTBD1Q9H0C5 482 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 LDAHQ9H6V9 325 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 DDX43Q9NXZ2 648 aaKnown RBP5.08□□□□□ -1.6
SFXN1-202ENST00000421887 FAM30AQ9NZY2 134 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 WDR35Q9P2L0 1181 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 PLEKHB1Q9UF11 243 aaPredicted RBP5.08□□□□□ -1.6
SFXN1-202ENST00000421887 KCNJ14Q9UNX9 436 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 PCDHB1Q9Y5F3 818 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 COMMD10Q9Y6G5 202 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 STON1Q9Y6Q2 735 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 PLXNA2O75051 1894 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 C2CD3Q4AC94 2353 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 NUMA1Q14980 2115 aa5.08□□□□□ -1.6
SFXN1-202ENST00000421887 NOTCH2Q04721 2471 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 PTPRJQ12913 1337 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ABCA12Q86UK0 2595 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ZNF840PA6NDX5 716 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 PIRO00625 290 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 VILLO15195 856 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 SLC16A4O15374 487 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 PROM1O43490 865 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 HUS1O60921 280 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 MED24O75448 989 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 SEMA4FO95754 770 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms