RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PTPN13Q12923 2485 aa16.76■□□□□ 0.27
UPF3AP3-201ENST00000420996 TRBV23OR9-2A0A075B6M9 112 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 A0A0U1RQS6 177 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 DUX1O43812 170 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 FZD6O60353 706 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 PDHA1P08559 390 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 ZNF30P17039 623 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 MAP4P27816 1152 aaKnown RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 PPM1FP49593 454 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 SKIDA1Q1XH10 827 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 SMTNL2Q2TAL5 461 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 LRRC66Q68CR7 880 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 SASS6Q6UVJ0 657 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 MARK2Q7KZI7 788 aaKnown RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 TRIM74Q86UV6 250 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 ZNF761Q86XN6 746 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 NLGN4XQ8N0W4 816 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 NLGN4YQ8NFZ3 816 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 SCAMP4Q969E2 229 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 KIAA1143Q96AT1 154 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 ZNF653Q96CK0 615 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 RTP4Q96DX8 246 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 COX14Q96I36 57 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 CSPG4P5Q96PW8 444 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 ZPBPQ9BS86 351 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 EFHD1Q9BUP0 239 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 EPN3Q9H201 632 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 HSD3B7Q9H2F3 369 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 HAUS4Q9H6D7 363 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 GPN2Q9H9Y4 310 aaPredicted RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 MRPL47Q9HD33 250 aaKnown RBP16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 FBXO8Q9NRD0 319 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 ANAPC2Q9UJX6 822 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 DOPEY2Q9Y3R5 2298 aa16.75■□□□□ 0.27
UPF3AP3-201ENST00000420996 NKX2-8O15522 239 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 MAP3K6O95382 1288 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 MAN1A1P33908 653 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 SERPINB6P35237 376 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 CASRP41180 1078 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 NCAPHQ15003 741 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 SNAP47Q5SQN1 464 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 CEACAM20Q6UY09 585 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 ZNF571Q7Z3V5 609 aaPredicted RBP16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 LRRC49Q8IUZ0 686 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 TEX26Q8N6G2 289 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 EXD1Q8NHP7 514 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 HSPH1Q92598 858 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 TRIM11Q96F44 468 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 AGAP2Q99490 1192 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 SARS2Q9NP81 518 aaKnown RBP16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 NT5MQ9NPB1 228 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 ZNHIT2Q9UHR6 403 aa16.74■□□□□ 0.27
UPF3AP3-201ENST00000420996 A0A0J9YYE9 177 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 LRRC53A6NM62 1247 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 A8MU76 341 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 EML2O95834 649 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 TRBC1P01850 177 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 MYBL1P10243 752 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 RARAP10276 462 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 TCF4P15884 667 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 STC1P52823 247 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 FOXK1P85037 733 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 HHEXQ03014 270 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 ABHD18Q0P651 414 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 UBAP2LQ14157 1087 aaKnown RBP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 ASIC2Q16515 512 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 IYDQ6PHW0 289 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 CLEC17AQ6ZS10 378 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 TIPARPQ7Z3E1 657 aaKnown RBP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 RAVER1Q8IY67 606 aaKnown RBP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 C9orf43Q8TAL5 461 aaPredicted RBP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 TEKT4Q8WW24 435 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 SH3KBP1Q96B97 665 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 SMIM14Q96QK8 99 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 CTRCQ99895 268 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 RIOK2Q9BVS4 552 aaKnown RBP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 TRIT1Q9H3H1 467 aaKnown RBP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 AIPL1Q9NZN9 384 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 VPS18Q9P253 973 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 ANKMY1Q9P2S6 941 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 MYO1AQ9UBC5 1043 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 DNPEPQ9ULA0 475 aa16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 TMEM184BQ9Y519 407 aaPredicted RBP16.73■□□□□ 0.27
UPF3AP3-201ENST00000420996 LOC101059948A0A1B0GTJ6 334 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 INPP4BO15327 924 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 DNAJC6O75061 913 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 ASMTLO95671 621 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 PRKAR1AP10644 381 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 CES1P23141 567 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 PRKCIP41743 596 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 EPHB1P54762 984 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 ITKQ08881 620 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 CDC20Q12834 499 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 STX1AQ16623 288 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 CHST15Q7LFX5 561 aaPredicted RBP16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 NCSTNQ92542 709 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 POLR1EQ9GZS1 481 aaKnown RBP16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 STN1Q9H668 368 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms