RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 DOK6Q6PKX4 331 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 EXD1Q8NHP7 514 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 ARRDC2Q8TBH0 407 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 PATE1Q8WXA2 126 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 USP7Q93009 1102 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 SCAMP4Q969E2 229 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 HDAC11Q96DB2 347 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 SGF29Q96ES7 293 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 COX14Q96I36 57 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 SMIM14Q96QK8 99 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 DPYSL5Q9BPU6 564 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 NUDT22Q9BRQ3 303 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 CTTNBP2NLQ9P2B4 639 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 CHKBQ9Y259 395 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 PRLP01236 227 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 H2AFZP0C0S5 128 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 MAN1A1P33908 653 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 GJC1P36383 396 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 FASLGP48023 281 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 LIMK2P53671 638 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 XKR5Q6UX68 686 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 ZNF574Q6ZN55 896 aaPredicted RBP17.26■□□□□ 0.35
MSH6-203ENST00000420813 USP53Q70EK8 1073 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 H2AFVQ71UI9 128 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 DTX1Q86Y01 620 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 GALNT13Q8IUC8 556 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 CTNNBL1Q8WYA6 563 aaPredicted RBP17.26■□□□□ 0.35
MSH6-203ENST00000420813 PCDH9Q9HC56 1237 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 FOXJ2Q9P0K8 574 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 VPS18Q9P253 973 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 TMEM98Q9Y2Y6 226 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 TTLL3Q9Y4R7 772 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 PCDHB11Q9Y5F2 797 aa17.26■□□□□ 0.35
MSH6-203ENST00000420813 IGHV1OR21-1A0A087WYE8 117 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 IGHV5-10-1A0A0J9YXX1 117 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 B8ZZF3 427 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 PPM1DO15297 605 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 MAP3K6O95382 1288 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 ITGB2P05107 769 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 HLA-DQB2P05538 268 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 CASP14P31944 242 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 TAS2R40P59535 323 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 GPLD1P80108 840 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 GBE1Q04446 702 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 SLC18A3Q16572 532 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 MANEAQ5SRI9 462 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 TRIM74Q86UV6 250 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 ZFAND4Q86XD8 727 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 CPNE8Q86YQ8 564 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 PQLC3Q8N755 202 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 OR4D9Q8NGE8 314 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 CCDC74BQ96LY2 380 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 AGAP2Q99490 1192 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 RIOK2Q9BVS4 552 aaKnown RBP17.25■□□□□ 0.35
MSH6-203ENST00000420813 WDR70Q9NW82 654 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 IFNKQ9P0W0 207 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 PLEKHM1Q9Y4G2 1056 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 PCDHGA3Q9Y5H0 932 aa17.25■□□□□ 0.35
MSH6-203ENST00000420813 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.25■□□□□ 0.351e-11■■■□□ 14.7
MSH6-203ENST00000420813 RGSL1A5PLK6 1076 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 ZNF487B1APH4 448 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 J3QKU1 62 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 CLDN7O95471 211 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 TPM3P06753 285 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 NIPAL4Q0D2K0 466 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 CCDC13Q8IYE1 715 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.24■□□□□ 0.35
MSH6-203ENST00000420813 LPCAT1Q8NF37 534 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 ZNF830Q96NB3 372 aaPredicted RBP17.24■□□□□ 0.35
MSH6-203ENST00000420813 TAAR9Q96RI9 348 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 KCNK4Q9NYG8 393 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 DTLQ9NZJ0 730 aa17.24■□□□□ 0.35
MSH6-203ENST00000420813 FLNBO75369 2602 aaKnown RBP17.24■□□□□ 0.35
MSH6-203ENST00000420813 C1orf232A0A0U1RR37 186 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 STMND1H3BQB6 276 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 AGRPO00253 132 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 INPP4BO15327 924 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 THRAP10827 490 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 CCL4P13236 92 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 CSF2RBP32927 897 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 SPINT3P49223 89 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 PPIDQ08752 370 aaKnown RBP17.23■□□□□ 0.35
MSH6-203ENST00000420813 SLC10A2Q12908 348 aaPredicted RBP17.23■□□□□ 0.35
MSH6-203ENST00000420813 SRSF6Q13247 344 aaKnown RBP17.23■□□□□ 0.35
MSH6-203ENST00000420813 HENMT1Q5T8I9 393 aaKnown RBP17.23■□□□□ 0.35
MSH6-203ENST00000420813 MARK2Q7KZI7 788 aaKnown RBP17.23■□□□□ 0.35
MSH6-203ENST00000420813 VSIG1Q86XK7 387 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 SFRP1Q8N474 314 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 CCNYQ8ND76 341 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 AGBL5Q8NDL9 886 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 RCBTB1Q8NDN9 531 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 RNF157Q96PX1 679 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 WDR24Q96S15 920 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 RMI1Q9H9A7 625 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 PKD2L2Q9NZM6 624 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 CNOT6Q9ULM6 557 aaKnown RBP17.23■□□□□ 0.35
MSH6-203ENST00000420813 PCDHGA4Q9Y5G9 962 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 TENM4Q6N022 2769 aa17.23■□□□□ 0.35
MSH6-203ENST00000420813 ASH1LQ9NR48 2969 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms