RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TAF1AQ15573 450 aaPredicted RBP18.55■□□□□ 0.56
PTCD3-204ENST00000418628 ZNF542PQ5EBM4 170 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 PDPK2PQ6A1A2 396 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 GLRX5Q86SX6 157 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 RBFAQ8N0V3 343 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 TRAM1L1Q8N609 369 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 OR56A4Q8NGH8 313 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 BRSK1Q8TDC3 778 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 OR1E3Q8WZA6 343 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 SLCO2A1Q92959 643 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 MAGOHBQ96A72 148 aaKnown RBP18.55■□□□□ 0.56
PTCD3-204ENST00000418628 ZSCAN5AQ9BUG6 496 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 UCKL1Q9NWZ5 548 aa18.55■□□□□ 0.56
PTCD3-204ENST00000418628 NCOR2Q9Y618 2525 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 DCDC2BA2VCK2 349 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 H3BM21 787 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 LDB2O43679 373 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 SDC3O75056 442 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 PPFIA2O75334 1257 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 KCNK5O95279 499 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 CEACAM5P06731 702 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 CEACAM1P13688 526 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 JUNDP17535 347 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 KELP23276 732 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 PSMA3P25788 255 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 CCDC137Q6PK04 289 aaKnown RBP18.54■□□□□ 0.56
PTCD3-204ENST00000418628 ENPP7Q6UWV6 458 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 LINC00523Q86TU6 105 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 TAB3Q8N5C8 712 aaPredicted RBP18.54■□□□□ 0.56
PTCD3-204ENST00000418628 DEFB124Q8NES8 71 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 BTN2A2Q8WVV5 523 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 CAMK1GQ96NX5 476 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 RAB6BQ9NRW1 208 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 KLQ9UEF7 1012 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 APOBEC3BQ9UH17 382 aaKnown RBP18.54■□□□□ 0.56
PTCD3-204ENST00000418628 ARL5AQ9Y689 179 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 CSNK1G3Q9Y6M4 447 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 KNTC1P50748 2209 aa18.54■□□□□ 0.56
PTCD3-204ENST00000418628 UNC13CQ8NB66 2214 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 GOLGA6L10A0A0M3HER8 536 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 PRSS38A1L453 326 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 PDE2AO00408 941 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-204ENST00000418628 RASGRP1O95267 797 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 SLC4A1P02730 911 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 FUCA1P04066 466 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 SRP54P61011 504 aaKnown RBP18.53■□□□□ 0.56
PTCD3-204ENST00000418628 PPARDQ03181 441 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 ZDHHC20Q5W0Z9 365 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 OR4C6Q8NH72 309 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 PTCD2Q8WV60 388 aaKnown RBP18.53■□□□□ 0.56
PTCD3-204ENST00000418628 TSACCQ96A04 125 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-204ENST00000418628 LRRC45Q96CN5 670 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 HIC2Q96JB3 615 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 VPS35Q96QK1 796 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 IL26Q9NPH9 171 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 CASS4Q9NQ75 786 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 PCYOX1Q9UHG3 505 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 TMPRSS11EQ9UL52 423 aa18.53■□□□□ 0.56
PTCD3-204ENST00000418628 GIPC1O14908 333 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 SCAMP1O15126 338 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 IVLP07476 585 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 TPSB2P20231 275 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 LPOP22079 712 aaPredicted RBP18.52■□□□□ 0.56
PTCD3-204ENST00000418628 SPAM1P38567 509 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 GRIA1P42261 906 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 BLKP51451 505 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 CDH17Q12864 832 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 KCNJ11Q14654 390 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 TPSAB1Q15661 275 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 INAVAQ3KP66 663 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 ZNF534Q76KX8 674 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 OR52K1Q8NGK4 314 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 CLPBQ9H078 707 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 BPIFA1Q9NP55 256 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 MRPL40Q9NQ50 206 aaKnown RBP18.52■□□□□ 0.56
PTCD3-204ENST00000418628 SMOXQ9NWM0 555 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 NLGN3Q9NZ94 848 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTCD3-204ENST00000418628 VPS18Q9P253 973 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 RNF14Q9UBS8 474 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 KCTD3Q9Y597 815 aa18.52■□□□□ 0.56
PTCD3-204ENST00000418628 OAS3Q9Y6K5 1087 aaKnown RBP18.52■□□□□ 0.56
PTCD3-204ENST00000418628 AGAP14A8MT82 685 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 TRIM38O00635 465 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 AQP9O43315 295 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 DKK1O94907 266 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 APRTP07741 180 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 NOVA1P51513 510 aaKnown RBP18.51■□□□□ 0.55
PTCD3-204ENST00000418628 PDE1BQ01064 536 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 PTPRCAPQ14761 206 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 KCTD19Q17RG1 926 aaPredicted RBP18.51■□□□□ 0.55
PTCD3-204ENST00000418628 ALS2CLQ60I27 953 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 PSAPL1Q6NUJ1 521 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 GSTA5Q7RTV2 222 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 TRIM74Q86UV6 250 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 FSTL5Q8N475 847 aaPredicted RBP18.51■□□□□ 0.55
PTCD3-204ENST00000418628 CAPZA3Q96KX2 299 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 SPATA16Q9BXB7 569 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 DDX47Q9H0S4 455 aaKnown RBP18.51■□□□□ 0.55
PTCD3-204ENST00000418628 SLC32A1Q9H598 525 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms