RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
LINCMD1-201ENST00000418518 PCDHB1Q9Y5F3 818 aa9.02□□□□□ -0.97
LINCMD1-201ENST00000418518 TCF20Q9UGU0 1960 aaKnown RBP9.02□□□□□ -0.97
LINCMD1-201ENST00000418518 A0A1W2PQ67 120 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 TSPAN11A1L157 253 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 NEMP2A6NFY4 417 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 TRPC5OSA6NMA1 111 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 AGAP14A8MT82 685 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 H3BMM5 538 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 GRM6O15303 877 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 KLK8O60259 260 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 DIAPH2O60879 1101 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 SMIM24O75264 130 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 VPS26AO75436 327 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 SRP72O76094 671 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 RHOBTB1O94844 696 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ARHGEF15O94989 841 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 PRAMEF12O95522 483 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 TSPAN12O95859 305 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ENO1P06733 434 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 PYGLP06737 847 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 TPBGLP0DKB5 382 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 PABPC1P11940 636 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 MTHFD2P13995 350 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 EN2P19622 333 aaPredicted RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 SERPINA4P29622 427 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 IRS1P35568 1242 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 CPOXP36551 454 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ABL2P42684 1182 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 CCR10P46092 362 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 KCNC1P48547 511 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 MNAT1P51948 309 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 EPHB1P54762 984 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 HERVK_113P63132 956 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 PDAP1Q13442 181 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 UBAP2LQ14157 1087 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 NAA25Q14CX7 972 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 HERC3Q15034 1050 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 OR4D1Q15615 310 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 PTPRNQ16849 979 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 DNAL1Q4LDG9 190 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 CFAP157Q5JU67 520 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ZNF678Q5SXM1 525 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 VWA5B1Q5TIE3 1220 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 LYPLAL1Q5VWZ2 237 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ELMSAN1Q6PJG2 1045 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 RINLQ6ZS11 566 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 TPGS1Q6ZTW0 290 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 LONP2Q86WA8 852 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 TMEM25Q86YD3 366 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 C7orf61Q8IZ16 206 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ARHGAP24Q8N264 748 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 NKAPQ8N5F7 415 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 RBM15BQ8NDT2 890 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ACTRT2Q8TDY3 377 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 IRF7Q92985 503 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 PDLIM5Q96HC4 596 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ZNF641Q96N77 438 aaPredicted RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ASB2Q96Q27 587 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 OR52B2Q96RD2 323 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ERVK-6Q9BXR3 956 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 GPR63Q9BZJ6 419 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 SMG9Q9H0W8 520 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 CCDC68Q9H2F9 335 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 ALG9Q9H6U8 611 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 EML4Q9HC35 981 aaKnown RBP9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 MRGBPQ9NV56 204 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 PLK2Q9NYY3 685 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 SLC25A13Q9UJS0 675 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 FBXO10Q9UK96 956 aa9.01□□□□□ -0.97
LINCMD1-201ENST00000418518 UBA6A0AVT1 1052 aaPredicted RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 A8MUI8 341 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 STX16-NPEPL1H3BU86 382 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 SDHDO14521 159 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 STX16O14662 325 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 ZNF197O14709 1029 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 PRMT5O14744 637 aaPredicted RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 SLC9A3R1O14745 358 aaPredicted RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 CHUKO15111 745 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 GYG2O15488 501 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 SLC4A1P02730 911 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 RPS17P08708 135 aaKnown RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 ALPIP09923 528 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 ITGALP20701 1170 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 PPARGP37231 505 aaPredicted RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 CDKN1CP49918 316 aaPredicted RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 C1QTNF8P60827 252 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 ERVK-21P61565 698 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 BTKQ06187 659 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 RAD51Q06609 339 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 KLF10Q13118 480 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 MYLK3Q32MK0 819 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 LSM12Q3MHD2 195 aaKnown RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 GPR33Q49SQ1 333 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 UNC50Q53HI1 259 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 PAQR3Q6TCH7 311 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 TPRG1Q6ZUI0 275 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 ACAD11Q709F0 780 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 CHSY3Q70JA7 882 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms