RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ATXN10Q9UBB4 475 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 MED16Q9Y2X0 877 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 SLC12A8A0AV02 714 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 TNPO2O14787 897 aaKnown RBP14.43□□□□□ -0.1
HDAC9-208ENST00000417496 STAMBPO95630 424 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 BMP2P12643 396 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 ZNF23P17027 643 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 NFKB2Q00653 900 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 NRG1Q02297 640 aaPredicted RBP14.43□□□□□ -0.1
HDAC9-208ENST00000417496 CLCQ05315 142 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 SERINC3Q13530 473 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 PLA2G4EQ3MJ16 856 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 HABP4Q5JVS0 413 aaKnown RBP14.43□□□□□ -0.1
HDAC9-208ENST00000417496 MRNIPQ6NTE8 343 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 PPP4R4Q6NUP7 873 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 UGT3A1Q6NUS8 523 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
HDAC9-208ENST00000417496 ZNF786Q8N393 782 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 LRRC58Q96CX6 371 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 TMEM74Q96NL1 305 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 SLC30A3Q99726 388 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 C1orf50Q9BV19 199 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 SOX17Q9H6I2 414 aaPredicted RBP14.43□□□□□ -0.1
HDAC9-208ENST00000417496 CATSPERZQ9NTU4 200 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 CCM2LQ9NUG4 571 aaPredicted RBP14.43□□□□□ -0.1
HDAC9-208ENST00000417496 TSR3Q9UJK0 312 aaKnown RBP14.43□□□□□ -0.1
HDAC9-208ENST00000417496 OAZ3Q9UMX2 235 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 SPO11Q9Y5K1 396 aa14.43□□□□□ -0.1
HDAC9-208ENST00000417496 RNF103-CHMP3A0A140T963 221 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 FGF4P08620 206 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 DSC3Q14574 896 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 LRRC23Q53EV4 343 aaPredicted RBP14.42□□□□□ -0.1
HDAC9-208ENST00000417496 KANK2Q63ZY3 851 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 HACD2Q6Y1H2 254 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ANKFN1Q8N957 763 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 TADA1Q96BN2 335 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 DUS3LQ96G46 650 aaKnown RBP14.42□□□□□ -0.1
HDAC9-208ENST00000417496 TCF12Q99081 682 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ZBED2Q9BTP6 218 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ANKRD60Q9BZ19 345 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 POLR1EQ9GZS1 481 aaKnown RBP14.42□□□□□ -0.1
HDAC9-208ENST00000417496 PREBQ9HCU5 417 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ARMC1Q9NVT9 282 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 MARCH2Q9P0N8 246 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 RNF112Q9ULX5 631 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ASB1Q9Y576 335 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 CROCCQ5TZA2 2017 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 IQCA1LA6NCM1 817 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 H0YJX3 145 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 INPP4BO15327 924 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 RHOBTB1O94844 696 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 LBPP18428 481 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 SLC26A3P40879 764 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 RGRP47804 291 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 KCNQ1P51787 676 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 TAF10Q12962 218 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ZNF235Q14590 738 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 PAGE3Q5JUK9 113 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 RAB44Q7Z6P3 723 aaPredicted RBP14.42□□□□□ -0.1
HDAC9-208ENST00000417496 GALNT7Q86SF2 657 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 RIN3Q8TB24 985 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 CDKN2AIPNLQ96HQ2 116 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 BTN2A3PQ96KV6 586 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 HBEGFQ99075 208 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 CCSER2Q9H7U1 834 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 SDR39U1Q9NRG7 319 aaPredicted RBP14.42□□□□□ -0.1
HDAC9-208ENST00000417496 PNPLA3Q9NST1 481 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 MRGBPQ9NV56 204 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ABCD2Q9UBJ2 740 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 RSL24D1Q9UHA3 163 aaKnown RBP14.42□□□□□ -0.1
HDAC9-208ENST00000417496 ZNF225Q9UK10 706 aa14.42□□□□□ -0.1
HDAC9-208ENST00000417496 IGLV3-10A0A075B6K4 115 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 ASPDHA6ND91 283 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 ARPC2O15144 300 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 OR1I1O60431 355 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 ECI2O75521 394 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 CRCPO75575 148 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 RPP40O75818 363 aaKnown RBP14.41□□□□□ -0.1
HDAC9-208ENST00000417496 ASGR1P07306 291 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 ATP4BP51164 291 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 STC1P52823 247 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 CYP51A1Q16850 503 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 NADSYN1Q6IA69 706 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 LPCAT2Q7L5N7 544 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 OFCC1Q8IZS5 231 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 FBXO39Q8N4B4 442 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 OR7D4Q8NG98 312 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 BRSK1Q8TDC3 778 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 FBXO32Q969P5 355 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 FBXL20Q96IG2 436 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 CDK15Q96Q40 435 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 HAUS8Q9BT25 410 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 AARSD1Q9BTE6 412 aaKnown RBP14.41□□□□□ -0.1
HDAC9-208ENST00000417496 SLC52A3Q9NQ40 469 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 NLRC5Q86WI3 1866 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 SCN4AP35499 1836 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 NPEPPSL1A6NEC2 478 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 GPR39O43194 453 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 KPNA6O60684 536 aa14.41□□□□□ -0.1
HDAC9-208ENST00000417496 TMCC1O94876 653 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms