RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DYNLT1P63172 113 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 CXADRP78310 365 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 ZFP36L1Q07352 338 aaKnown RBP15.02■□□□□ -0
UBXN4-203ENST00000416538 ADCY2Q08462 1091 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 TCEAL1Q15170 157 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 LLGL1Q15334 1064 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 PYCR3Q53H96 274 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 HENMT1Q5T8I9 393 aaKnown RBP15.02■□□□□ -0
UBXN4-203ENST00000416538 MARK2Q7KZI7 788 aaKnown RBP15.02■□□□□ -0
UBXN4-203ENST00000416538 LYSMD3Q7Z3D4 306 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 VSIG1Q86XK7 387 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 RHOT2Q8IXI1 618 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 ZDHHC1Q8WTX9 485 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 TADA1Q96BN2 335 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 OR2M4Q96R27 311 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 GSDMCQ9BYG8 508 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 RDH14Q9HBH5 336 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 KCTD5Q9NXV2 234 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 LRIT1Q9P2V4 623 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 SAE1Q9UBE0 346 aaPredicted RBP15.02■□□□□ -0
UBXN4-203ENST00000416538 LCMT1Q9UIC8 334 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 COL6A6A6NMZ7 2263 aa15.02□□□□□ -0.01
UBXN4-203ENST00000416538 C1orf232A0A0U1RR37 186 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 PLD2O14939 933 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 KLK10O43240 276 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 DNAJC6O75061 913 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 ATP1A1P05023 1023 aaKnown RBP15.01□□□□□ -0.01
UBXN4-203ENST00000416538 ITGA2BP08514 1039 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 PIRTP0C851 137 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 TNNT1P13805 278 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 PNLIPP16233 465 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 ITIH1P19827 911 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 NFKBIAP25963 317 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 RBMS1P29558 406 aaKnown RBP15.01□□□□□ -0.01
UBXN4-203ENST00000416538 CSF2RBP32927 897 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 ARHGAP25P42331 645 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 OR1D5P58170 312 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 RPL26P61254 145 aaKnown RBP15.01□□□□□ -0.01
UBXN4-203ENST00000416538 AP1B1Q10567 949 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 ILF3Q12906 894 aaKnown RBP eCLIP15.01□□□□□ -0.013e-8■■■■□ 26.4
UBXN4-203ENST00000416538 SRSF6Q13247 344 aaKnown RBP15.01□□□□□ -0.01
UBXN4-203ENST00000416538 CLN3Q13286 438 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 NR1D2Q14995 579 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 C16orf72Q14CZ0 275 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 TAZQ16635 292 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 LRRC38Q5VT99 294 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 RAB11FIP2Q7L804 512 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 ARL14Q8N4G2 192 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 OR6C4Q8NGE1 309 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 KIAA1524Q8TCG1 905 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 IMP4Q96G21 291 aaKnown RBP15.01□□□□□ -0.01
UBXN4-203ENST00000416538 NUDT22Q9BRQ3 303 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 SEMA6CQ9H3T2 930 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 RPL26L1Q9UNX3 145 aaKnown RBP15.01□□□□□ -0.01
UBXN4-203ENST00000416538 PRKAB1Q9Y478 270 aa15.01□□□□□ -0.01
UBXN4-203ENST00000416538 ANKRD66B4E2M5 251 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 AKR1B15C9JRZ8 316 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 PPM1DO15297 605 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 MT-CYBP00156 380 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 KRT10P13645 584 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 CES1P23141 567 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 ACTR1BP42025 376 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 CDKN2BP42772 138 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 SPINT3P49223 89 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 ACTR1AP61163 376 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 CFHR1Q03591 330 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 PRKD1Q15139 912 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 ZNF574Q6ZN55 896 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 NLRP8Q86W28 1048 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 ZNF761Q86XN6 746 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 RFX6Q8HWS3 928 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 CNGA4Q8IV77 575 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 NRSN1Q8IZ57 195 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 FBXO39Q8N4B4 442 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 SPATA22Q8NHS9 363 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 TRAF3IP1Q8TDR0 691 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 ZNF830Q96NB3 372 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 AGAP3Q96P47 875 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 UBL7Q96S82 380 aaPredicted RBP15□□□□□ -0.01
UBXN4-203ENST00000416538 CDH19Q9H159 772 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 INTUQ9ULD6 942 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 LOXL2Q9Y4K0 774 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 CFAP46Q8IYW2 2715 aa15□□□□□ -0.01
UBXN4-203ENST00000416538 ATXN7O15265 892 aaPredicted RBP14.99□□□□□ -0.01
UBXN4-203ENST00000416538 TPM1P09493 284 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 PTPN3P26045 913 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 SLC5A2P31639 672 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 CD68P34810 354 aaPredicted RBP14.99□□□□□ -0.01
UBXN4-203ENST00000416538 MLLT3P42568 568 aaPredicted RBP14.99□□□□□ -0.01
UBXN4-203ENST00000416538 HADHBP55084 474 aaKnown RBP14.99□□□□□ -0.01
UBXN4-203ENST00000416538 NOMO1Q15155 1222 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 MAP9Q49MG5 647 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 ZNF648Q5T619 568 aaPredicted RBP14.99□□□□□ -0.01
UBXN4-203ENST00000416538 GPR155Q7Z3F1 870 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 KDELC2Q7Z4H8 507 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 RHOT1Q8IXI2 618 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 NDUFAF2Q8N183 169 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 PMEPA1Q969W9 287 aa14.99□□□□□ -0.01
UBXN4-203ENST00000416538 TMEM74Q96NL1 305 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms