RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 CRADDP78560 199 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 CYP4F3Q08477 520 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 CNGA3Q16281 694 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 CERCAMQ5T4B2 595 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 CASC4Q6P4E1 433 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 IL27RAQ6UWB1 636 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 CCDC25Q86WR0 208 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
CPNE1-209ENST00000415920 MCUQ8NE86 351 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 PPHLN1Q8NEY8 458 aaKnown RBP13.6□□□□□ -0.23
CPNE1-209ENST00000415920 FBXO25Q8TCJ0 367 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 UBXN4Q92575 508 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 FAM131CQ96AQ9 280 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 SCRN2Q96FV2 425 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 PWWP2AQ96N64 755 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 GPR63Q9BZJ6 419 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 ARNT2Q9HBZ2 717 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 PREBQ9HCU5 417 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 SYBUQ9NX95 663 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.6□□□□□ -0.232e-16■■■□□ 16.4
CPNE1-209ENST00000415920 HACD3Q9P035 362 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 COQ6Q9Y2Z9 468 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 LRP4O75096 1905 aa13.6□□□□□ -0.23
CPNE1-209ENST00000415920 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3DA0A087WVF3 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3IA0A087WXS9 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3EA0A087X179 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3KA0A087X1G2 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3FA6NER0 549 aaPredicted RBP13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3LB9A6J9 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 AP3B1O00203 1094 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TSPAN6O43657 245 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 BUD23O43709 281 aaKnown RBP13.59□□□□□ -0.23
CPNE1-209ENST00000415920 MMP20O60882 483 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 AVILO75366 819 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 IGHV4-34P06331 123 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 C1SP09871 688 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3HP0C7X1 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 C6P13671 934 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 ZNF30P17039 623 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 MAT2AP31153 395 aaKnown RBP13.59□□□□□ -0.23
CPNE1-209ENST00000415920 CTSKP43235 329 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 LIG3P49916 1009 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 ARL4CP56559 192 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 CAV1Q03135 178 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 DNAJC21Q5F1R6 531 aaKnown RBP13.59□□□□□ -0.23
CPNE1-209ENST00000415920 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3GQ6DHY5 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3CQ6IPX1 549 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 CRTC1Q6UUV9 634 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 IFT20Q8IY31 132 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 TBC1D3Q8IZP1 549 aaPredicted RBP13.59□□□□□ -0.23
CPNE1-209ENST00000415920 OR2T34Q8NGX1 318 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 ART4Q93070 314 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 SLC6A18Q96N87 628 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 LYSMD1Q96S90 227 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 EBF2Q9HAK2 575 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 BFARQ9NZS9 450 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 SAMD15Q9P1V8 674 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 PPIL1Q9Y3C6 166 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 ARL5AQ9Y689 179 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 PIKFYVEQ9Y2I7 2098 aa13.59□□□□□ -0.23
CPNE1-209ENST00000415920 ZFC3H1O60293 1989 aaKnown RBP13.58□□□□□ -0.24
CPNE1-209ENST00000415920 A0A1W2PQU0 124 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 WNT9AO14904 365 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 AURKAO14965 403 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 TP73O15350 636 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 LZTS3O60299 673 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-209ENST00000415920 CLDN7O95471 211 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 CRTAMO95727 393 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 WNT1P04628 370 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 MLNP12872 115 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 DHX9Q08211 1270 aaKnown RBP13.58□□□□□ -0.24
CPNE1-209ENST00000415920 ACOX1Q15067 660 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 TMEM52BQ4KMG9 183 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 ALS2CLQ60I27 953 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 KIAA1161Q6NSJ0 714 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 CAND1Q86VP6 1230 aaKnown RBP13.58□□□□□ -0.24
CPNE1-209ENST00000415920 HORMAD1Q86X24 394 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 GATAD2AQ86YP4 633 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 PDIK1LQ8N165 341 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 MPP5Q8N3R9 675 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 SEC14L1Q92503 715 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 KLK6Q92876 244 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
CPNE1-209ENST00000415920 CDC6Q99741 560 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 MYOCQ99972 504 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 FRMD8Q9BZ67 464 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-209ENST00000415920 IL22Q9GZX6 179 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 PCED1AQ9H1Q7 454 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 TRABDQ9H4I3 376 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 ZFYVE1Q9HBF4 777 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 MAGEE1Q9HCI5 957 aa13.58□□□□□ -0.24
CPNE1-209ENST00000415920 GDF3Q9NR23 364 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms