RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 RASGRF2O14827 1237 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 LZTS3O60299 673 aaPredicted RBP14.18□□□□□ -0.14
SF3B1-204ENST00000414963 CDH16O75309 829 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 PIAS1O75925 651 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 TM7SF2O76062 418 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 PRAMEF1O95521 474 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 S1PR4O95977 384 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 GP5P40197 560 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 LEPRP48357 1165 aaKnown RBP14.18□□□□□ -0.14
SF3B1-204ENST00000414963 NFATC2Q13469 925 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 EFTUD2Q15029 972 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■□□□ 13.7
SF3B1-204ENST00000414963 CHRNA6Q15825 494 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 ZNF284Q2VY69 593 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 FASTKD1Q53R41 847 aaKnown RBP14.18□□□□□ -0.14
SF3B1-204ENST00000414963 AARS2Q5JTZ9 985 aaKnown RBP14.18□□□□□ -0.14
SF3B1-204ENST00000414963 GRTP1Q5TC63 336 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 LYPLAL1Q5VWZ2 237 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 ZNF470Q6ECI4 717 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 ADGRD1Q6QNK2 874 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 FAM151BQ6UXP7 276 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 BMP8AQ7Z5Y6 402 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 TRIM69Q86WT6 500 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 CTAGE3PQ8IX95 158 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 PIANPQ8IYJ0 282 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 DCAKDQ8WVC6 231 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 PAFAH2Q99487 392 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 ZSCAN5AQ9BUG6 496 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 WSB2Q9NYS7 404 aaPredicted RBP14.18□□□□□ -0.14
SF3B1-204ENST00000414963 TTC28Q96AY4 2481 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3DA0A087WVF3 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3IA0A087WXS9 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3EA0A087X179 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3KA0A087X1G2 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 A0A1W2PQU0 124 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3FA6NER0 549 aaPredicted RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3LB9A6J9 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 POC1B-GALNT4F8VUJ3 575 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A9O60656 530 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 RNGTTO60942 597 aaKnown RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 AHSGP02765 367 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 PYGLP06737 847 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 INHBAP08476 426 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3HP0C7X1 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 ITGALP20701 1170 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TEAD1P28347 426 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 GABRB3P28472 473 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 CD6P30203 668 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 ACSL1P33121 698 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 SLC1A2P43004 574 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TTPAP49638 278 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 SERPINB9P50453 376 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 CCR5P51681 352 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 CSE1LP55060 971 aaKnown RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 CTBP1Q13363 440 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 SEMA3AQ14563 771 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 RNF187Q5TA31 235 aaPredicted RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 SEL1L3Q68CR1 1132 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3GQ6DHY5 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3CQ6IPX1 549 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 PACS1Q6VY07 963 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 FAM124AQ86V42 546 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 DENND6AQ8IWF6 608 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBC1D3Q8IZP1 549 aaPredicted RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 EPS8L3Q8TE67 593 aaKnown RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 SCAMP4Q969E2 229 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 ULK4Q96C45 1275 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 AP2M1Q96CW1 435 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 NUS1Q96E22 293 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 LENG8Q96PV6 779 aaPredicted RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 VPS35Q96QK1 796 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 SH3GL2Q99962 352 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 RIOK2Q9BVS4 552 aaKnown RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 PCED1AQ9H1Q7 454 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 ACBD3Q9H3P7 528 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 ASB8Q9H765 288 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A7Q9HAW7 530 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A10Q9HAW8 530 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A8Q9HAW9 530 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 CD93Q9NPY3 652 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 PRMT8Q9NR22 394 aaPredicted RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 INTS10Q9NVR2 710 aaKnown RBP14.17□□□□□ -0.14
SF3B1-204ENST00000414963 LGALS13Q9UHV8 139 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 VPS9D1Q9Y2B5 631 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 PSAT1Q9Y617 370 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 IKBKGQ9Y6K9 419 aa14.17□□□□□ -0.14
SF3B1-204ENST00000414963 IGHV1OR15-9A0A0B4J2B8 117 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 PFDN6O15212 129 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 LATO43561 262 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 SEMA4FO95754 770 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A6P19224 532 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A1P22309 533 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A4P22310 534 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 CNTFP26441 200 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A3P35503 534 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 UGT1A5P35504 534 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 PPARGP37231 505 aaPredicted RBP14.16□□□□□ -0.14
SF3B1-204ENST00000414963 CDKN1CP49918 316 aaPredicted RBP14.16□□□□□ -0.14
SF3B1-204ENST00000414963 ADARP55265 1226 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms