RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 TRNAU1APQ9NX07 287 aaKnown RBP26.16■■□□□ 1.78
VEGFA-207ENST00000413642 PKD2L2Q9NZM6 624 aa26.16■■□□□ 1.78
VEGFA-207ENST00000413642 KLHL8Q9P2G9 620 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-207ENST00000413642 OAS3Q9Y6K5 1087 aaKnown RBP26.16■■□□□ 1.78
VEGFA-207ENST00000413642 RNF215Q9Y6U7 377 aa26.16■■□□□ 1.78
VEGFA-207ENST00000413642 MACROD2A1Z1Q3 448 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 FGF1P05230 155 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 PDX1P52945 283 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 MAZP56270 477 aaKnown RBP26.15■■□□□ 1.78
VEGFA-207ENST00000413642 ILF3Q12906 894 aaKnown RBP eCLIP26.15■■□□□ 1.78
VEGFA-207ENST00000413642 C14orf28Q4W4Y0 310 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 HENMT1Q5T8I9 393 aaKnown RBP26.15■■□□□ 1.78
VEGFA-207ENST00000413642 ALS2CLQ60I27 953 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 KDELC1Q6UW63 502 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 RBM44Q6ZP01 1051 aaKnown RBP26.15■■□□□ 1.78
VEGFA-207ENST00000413642 PID1Q7Z2X4 250 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 GPR26Q8NDV2 337 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 SCARF2Q96GP6 870 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-207ENST00000413642 OXNAD1Q96HP4 312 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-207ENST00000413642 DCBLD2Q96PD2 775 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 GSDMCQ9BYG8 508 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 ZFYVE1Q9HBF4 777 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 TAAR2Q9P1P5 351 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 IMPACTQ9P2X3 320 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 ZNF711Q9Y462 761 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 PRKAB1Q9Y478 270 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 ENTPD2Q9Y5L3 495 aa26.15■■□□□ 1.78
VEGFA-207ENST00000413642 KNTC1P50748 2209 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 A0A1W2PQM1 296 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 PMS2P1A4D2B8 440 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 H7C0C1 242 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 APOC4-APOC2K7ER74 178 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 NTN3O00634 580 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-207ENST00000413642 AURKAO14965 403 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 ASMTLO95671 621 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 NDST3O95803 873 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 APOC2P02655 101 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 RPLP0P05388 317 aaKnown RBP26.14■■□□□ 1.78
VEGFA-207ENST00000413642 PYGMP11217 842 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 RBL1P28749 1068 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 ATP5OP48047 213 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 WNT3AP56704 352 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 HLTFQ14527 1009 aaKnown RBP eCLIP26.14■■□□□ 1.786e-8■■□□□ 12.7
VEGFA-207ENST00000413642 SLC14A2Q15849 920 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 PYCR3Q53H96 274 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 CCDC181Q5TID7 509 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 TMC3Q7Z5M5 1100 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 ACTL9Q8TC94 416 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 PATE1Q8WXA2 126 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 CALR3Q96L12 384 aaKnown RBP26.14■■□□□ 1.78
VEGFA-207ENST00000413642 OR2M4Q96R27 311 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 OSBPL8Q9BZF1 889 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 MAGEE1Q9HCI5 957 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 ARFGAP3Q9NP61 516 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 FAM153AQ9UHL3 310 aa26.14■■□□□ 1.78
VEGFA-207ENST00000413642 ASXL3Q9C0F0 2248 aa26.14■■□□□ 1.77
VEGFA-207ENST00000413642 CCDC66A2RUB6 948 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 CHRNA4P43681 627 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 RWDD2BP57060 319 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 COPS2P61201 443 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 GABREP78334 506 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 OTUD4Q01804 1114 aaKnown RBP26.13■■□□□ 1.77
VEGFA-207ENST00000413642 SPIDRQ14159 915 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 CERCAMQ5T4B2 595 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 ZNF648Q5T619 568 aaPredicted RBP26.13■■□□□ 1.77
VEGFA-207ENST00000413642 RAVER1Q8IY67 606 aaKnown RBP26.13■■□□□ 1.77
VEGFA-207ENST00000413642 ZDHHC1Q8WTX9 485 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 GPR63Q9BZJ6 419 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 LRIT1Q9P2V4 623 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 PACSIN2Q9UNF0 486 aaPredicted RBP26.13■■□□□ 1.77
VEGFA-207ENST00000413642 MYLKQ15746 1914 aa26.13■■□□□ 1.77
VEGFA-207ENST00000413642 FREM2Q5SZK8 3169 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 RGSL1A5PLK6 1076 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 HACD1B0YJ81 288 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 MTSS1O43312 755 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 PYGLP06737 847 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 C3orf38Q5JPI3 329 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 B3GNT8Q7Z7M8 397 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 SLC25A41Q8N5S1 370 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 MRGPRX2Q96LB1 330 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 FCRL5Q96RD9 977 aa26.12■■□□□ 1.77
VEGFA-207ENST00000413642 APC2O95996 2303 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 LOC285095A0A1B0GVY8 99 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 DNAJC6O75061 913 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 TCEA3O75764 348 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 ECEL1O95672 775 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 GLB1P16278 677 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 ACTR1BP42025 376 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 ACTR1AP61163 376 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 XRCC4Q13426 336 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 COL28A1Q2UY09 1125 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 CCDC70Q6NSX1 233 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 C17orf82Q86X59 251 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-207ENST00000413642 SPATA16Q9BXB7 569 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 LRRN3Q9H3W5 708 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 BPIFA1Q9NP55 256 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 RSPH14Q9UHP6 348 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 ATXN7L1Q9ULK2 861 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-207ENST00000413642 SATB2Q9UPW6 733 aa26.11■■□□□ 1.77
VEGFA-207ENST00000413642 COL27A1Q8IZC6 1860 aaPredicted RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms