RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 FAM83DQ9H4H8 585 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 RSPH14Q9UHP6 348 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 TRHDEQ9UKU6 1024 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 SUFUQ9UMX1 484 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 CLCA2Q9UQC9 943 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 SLC17A4Q9Y2C5 497 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 ZNF711Q9Y462 761 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 LOC285095A0A1B0GVY8 99 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 FADS2P1A8MWK0 482 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 CASC3O15234 703 aaKnown RBP14.73□□□□□ -0.05
LIMS4-201ENST00000413601 KRT86O43790 486 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 MT-CO3P00414 261 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 PTMAP06454 111 aaKnown RBP14.73□□□□□ -0.05
LIMS4-201ENST00000413601 SIRPB2Q5JXA9 342 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 HENMT1Q5T8I9 393 aaKnown RBP14.73□□□□□ -0.05
LIMS4-201ENST00000413601 TMC3Q7Z5M5 1100 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 CDKL3Q8IVW4 592 aaPredicted RBP14.73□□□□□ -0.05
LIMS4-201ENST00000413601 SFTPA2Q8IWL1 248 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 LRRC8AQ8IWT6 810 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 SLC25A41Q8N5S1 370 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 GPR26Q8NDV2 337 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 CCDC112Q8NEF3 446 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 IPMKQ8NFU5 416 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 GPBAR1Q8TDU6 330 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 COX14Q96I36 57 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 MRGPRX2Q96LB1 330 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 TSGA10Q9BZW7 698 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 CCDC86Q9H6F5 360 aaKnown RBP14.73□□□□□ -0.05
LIMS4-201ENST00000413601 CNOT6Q9ULM6 557 aaKnown RBP14.73□□□□□ -0.05
LIMS4-201ENST00000413601 SPO11Q9Y5K1 396 aa14.73□□□□□ -0.05
LIMS4-201ENST00000413601 ZNF106Q9H2Y7 1883 aaKnown RBP14.73□□□□□ -0.05
LIMS4-201ENST00000413601 KIF26BQ2KJY2 2108 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 RGSL1A5PLK6 1076 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 AURKAO14965 403 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 KCNN4O15554 427 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 ASMTLO95671 621 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 ATP1A1P05023 1023 aaKnown RBP14.72□□□□□ -0.05
LIMS4-201ENST00000413601 IVLP07476 585 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 AK4P27144 223 aaPredicted RBP14.72□□□□□ -0.05
LIMS4-201ENST00000413601 CHRNA4P43681 627 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 CYP4F3Q08477 520 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 MPP3Q13368 585 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 ANKRD20A2Q5SQ80 823 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 ANKRD20A1Q5TYW2 823 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 ANKRD20A3Q5VUR7 823 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 CDCP2Q5VXM1 449 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 ALS2CLQ60I27 953 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 MARK2Q7KZI7 788 aaKnown RBP14.72□□□□□ -0.05
LIMS4-201ENST00000413601 NRROSQ86YC3 692 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 CACTIN-AS1Q8N1I8 211 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 DCBLD1Q8N8Z6 715 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 GPR156Q8NFN8 814 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 NAT6Q93015 286 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 SCARF2Q96GP6 870 aaPredicted RBP14.72□□□□□ -0.05
LIMS4-201ENST00000413601 FERMT1Q9BQL6 677 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 GORASP1Q9BQQ3 440 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 SPATA16Q9BXB7 569 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 GBA3Q9H227 469 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 DPEP2Q9H4A9 486 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 SPATS2LQ9NUQ6 558 aaKnown RBP14.72□□□□□ -0.05
LIMS4-201ENST00000413601 TRNAU1APQ9NX07 287 aaKnown RBP14.72□□□□□ -0.05
LIMS4-201ENST00000413601 PLEKHM1Q9Y4G2 1056 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 GPSM3Q9Y4H4 160 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 ST14Q9Y5Y6 855 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 UNC13CQ8NB66 2214 aa14.72□□□□□ -0.05
LIMS4-201ENST00000413601 TCRBV7S2A1N4TA0A589 114 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 GOLGA6L9A6NEM1 432 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 B4DGG1 531 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 TAF4O00268 1085 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 NOBOXO60393 691 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 EPOP01588 193 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 ADCY8P40145 1251 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 TNNT3P45378 269 aaPredicted RBP14.71□□□□□ -0.05
LIMS4-201ENST00000413601 CTBSQ01459 385 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 ILF3Q12906 894 aaKnown RBP eCLIP14.71□□□□□ -0.05
LIMS4-201ENST00000413601 SLC1A5Q15758 541 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 ITPRIPL1Q6GPH6 555 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 OGFOD3Q6PK18 319 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 CCDC110Q8TBZ0 833 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 CCDC74AQ96AQ1 378 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 SRPK1Q96SB4 655 aaKnown RBP14.71□□□□□ -0.05
LIMS4-201ENST00000413601 CCDC3Q9BQI4 270 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 GSDMCQ9BYG8 508 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 BPIFA1Q9NP55 256 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 RABGEF1Q9UJ41 708 aa14.71□□□□□ -0.05
LIMS4-201ENST00000413601 OAS3Q9Y6K5 1087 aaKnown RBP14.71□□□□□ -0.05
LIMS4-201ENST00000413601 WDFY3Q8IZQ1 3526 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 CSO75390 466 aaKnown RBP14.7□□□□□ -0.06
LIMS4-201ENST00000413601 ANXA9O76027 345 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 STK10O94804 968 aaKnown RBP14.7□□□□□ -0.06
LIMS4-201ENST00000413601 AGTP01019 485 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 CCDC175P0C221 793 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 BPIP17213 487 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 PSMB4P28070 264 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 GEMP55040 296 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 DCDC1P59894 354 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 CCZ1BP86790 482 aa14.7□□□□□ -0.06
LIMS4-201ENST00000413601 CCZ1P86791 482 aaPredicted RBP14.7□□□□□ -0.06
LIMS4-201ENST00000413601 KLF1Q13351 362 aaPredicted RBP14.7□□□□□ -0.06
LIMS4-201ENST00000413601 PYCR3Q53H96 274 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms