RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 RANBP10Q6VN20 620 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 ARHGEF18Q6ZSZ5 1173 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 TRIM74Q86UV6 250 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 KLHDC8BQ8IXV7 354 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 SDR16C5Q8N3Y7 309 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 TTC30BQ8N4P2 665 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 PTCD2Q8WV60 388 aaKnown RBP10.02□□□□□ -0.81
TMEM248-202ENST00000413593 RTP4Q96DX8 246 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 COX14Q96I36 57 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 HIC2Q96JB3 615 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 PPP1R2P1Q96PQ5 205 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 FICDQ9BVA6 458 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 BOCQ9BWV1 1114 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 FRMD8P1Q9BZ68 369 aaPredicted RBP10.02□□□□□ -0.81
TMEM248-202ENST00000413593 CDH19Q9H159 772 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 TRABDQ9H4I3 376 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 CARS2Q9HA77 564 aaKnown RBP10.02□□□□□ -0.81
TMEM248-202ENST00000413593 RAD18Q9NS91 495 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 HACD3Q9P035 362 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 MOSPD1Q9UJG1 213 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 KLK13Q9UKR3 277 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 CNOT6Q9ULM6 557 aaKnown RBP10.02□□□□□ -0.81
TMEM248-202ENST00000413593 SLC17A4Q9Y2C5 497 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 AAR2Q9Y312 384 aaKnown RBP10.02□□□□□ -0.81
TMEM248-202ENST00000413593 U3KQA8 63 aa10.02□□□□□ -0.81
TMEM248-202ENST00000413593 FAM221BA6H8Z2 402 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 FADS2P1A8MWK0 482 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 INPP4BO15327 924 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 METTL18O95568 372 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 FGGP02679 453 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 IVLP07476 585 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 CDK4P11802 303 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 BPIP17213 487 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 STIP1P31948 543 aaKnown RBP10.01□□□□□ -0.81
TMEM248-202ENST00000413593 POLD2P49005 469 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 DUSP3P51452 185 aaPredicted RBP10.01□□□□□ -0.81
TMEM248-202ENST00000413593 OLIG2Q13516 323 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 SMAD1Q15797 465 aaKnown RBP10.01□□□□□ -0.81
TMEM248-202ENST00000413593 PARP6Q2NL67 630 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 P3H1Q32P28 736 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 ALS2CLQ60I27 953 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 DOK6Q6PKX4 331 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 GKN2Q86XP6 184 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 SLC35F3Q8IY50 421 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 TRAM1L1Q8N609 369 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 BLOC1S5Q8TDH9 187 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 C1orf54Q8WWF1 131 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 SCG3Q8WXD2 468 aaKnown RBP10.01□□□□□ -0.81
TMEM248-202ENST00000413593 SCARF2Q96GP6 870 aaPredicted RBP10.01□□□□□ -0.81
TMEM248-202ENST00000413593 APOL2Q9BQE5 337 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 TMEM168Q9H0V1 697 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 NCKIPSDQ9NZQ3 722 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 IL17CQ9P0M4 197 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 SUFUQ9UMX1 484 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 TMEM98Q9Y2Y6 226 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 NEUROG3Q9Y4Z2 214 aa10.01□□□□□ -0.81
TMEM248-202ENST00000413593 CHD8Q9HCK8 2581 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 CEP104O60308 925 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 ATP1A1P05023 1023 aaKnown RBP10□□□□□ -0.81
TMEM248-202ENST00000413593 CXCR5P32302 372 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 GNPDA1P46926 289 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 ILF3Q12906 894 aaKnown RBP eCLIP10□□□□□ -0.81
TMEM248-202ENST00000413593 MSLNQ13421 630 aaPredicted RBP10□□□□□ -0.81
TMEM248-202ENST00000413593 SNX1Q13596 522 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 SPARCL1Q14515 664 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 NR0B2Q15466 257 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 CCNG2Q16589 344 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 KCTD11Q693B1 232 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 PDPK2PQ6A1A2 396 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 DENND5AQ6IQ26 1287 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 TMPRSS7Q7RTY8 843 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 GLT6D1Q7Z4J2 308 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 TAF8Q7Z7C8 310 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 ARL10Q8N8L6 244 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 CCL4L1Q8NHW4 92 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 GPBAR1Q8TDU6 330 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 PLEKHG4BQ96PX9 1271 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 TBL1YQ9BQ87 522 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 ZSCAN5AQ9BUG6 496 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 SPATA16Q9BXB7 569 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 SUDS3Q9H7L9 328 aaPredicted RBP10□□□□□ -0.81
TMEM248-202ENST00000413593 ARNT2Q9HBZ2 717 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 BPIFA1Q9NP55 256 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 EVA1BQ9NVM1 165 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 TRNAU1APQ9NX07 287 aaKnown RBP10□□□□□ -0.81
TMEM248-202ENST00000413593 TRMT1Q9NXH9 659 aaKnown RBP10□□□□□ -0.81
TMEM248-202ENST00000413593 VPS18Q9P253 973 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 GPR34Q9UPC5 381 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 ZNF148Q9UQR1 794 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 MSRB2Q9Y3D2 182 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 JRKLQ9Y4A0 524 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 OAS3Q9Y6K5 1087 aaKnown RBP10□□□□□ -0.81
TMEM248-202ENST00000413593 TP53BP1Q12888 1972 aaPredicted RBP10□□□□□ -0.81
TMEM248-202ENST00000413593 LRRK1Q38SD2 2015 aa10□□□□□ -0.81
TMEM248-202ENST00000413593 ACACBO00763 2458 aa9.99□□□□□ -0.81
TMEM248-202ENST00000413593 ARID1BQ8NFD5 2236 aaPredicted RBP9.99□□□□□ -0.81
TMEM248-202ENST00000413593 CPED1A4D0V7 1026 aa9.99□□□□□ -0.81
TMEM248-202ENST00000413593 EME2A4GXA9 379 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms