RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RGS18Q9NS28 235 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 POLG2Q9UHN1 485 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 DSEQ9UL01 958 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 WDR37Q9Y2I8 494 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 UBXN8O00124 270 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 EEDO75530 441 aaKnown RBP17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SERPINB7O75635 380 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SNAP29O95721 258 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SMIM10L2AP0DMW4 78 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SMIM10L2BP0DMW5 78 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 MTHFD1P11586 935 aaKnown RBP17.57■□□□□ 0.4
SDCBP-202ENST00000413219 CHRM3P20309 590 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 HTR1EP28566 365 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SUOXP51687 545 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 RCAN2Q14206 197 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 NEDD8Q15843 81 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 PCSK7Q16549 785 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 GEN1Q17RS7 908 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 NOMO2Q5JPE7 1267 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 ARTNQ5T4W7 220 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 NIPAL1Q6NVV3 410 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 MAGEE2Q8TD90 523 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-202ENST00000413219 TMEM40Q8WWA1 233 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 NRBF2Q96F24 287 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SLC30A3Q99726 388 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 BDH2Q9BUT1 245 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 TSPYL2Q9H2G4 693 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-202ENST00000413219 TUBB1Q9H4B7 451 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 GPN2Q9H9Y4 310 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SEPT3Q9UH03 358 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 PAGE1O75459 146 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 ALBP02768 609 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 PRR35P0CG20 571 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SMPD1P17405 629 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 MAP4P27816 1152 aaKnown RBP17.57■□□□□ 0.4
SDCBP-202ENST00000413219 BAG6P46379 1132 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 KCNK10P57789 538 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 FAM219BQ5XKK7 198 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 GRAMD4Q6IC98 578 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 RTL3Q8N8U3 475 aaKnown RBP17.57■□□□□ 0.4
SDCBP-202ENST00000413219 BPIFB1Q8TDL5 484 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 RAB2BQ8WUD1 216 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 MAGED4Q96JG8 741 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 TMEM45AQ9NWC5 275 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 GIMAP2Q9UG22 337 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 PTGDR2Q9Y5Y4 395 aa17.57■□□□□ 0.4
SDCBP-202ENST00000413219 SULT1C4O75897 302 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 SNAI1O95863 264 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 NPPAP01160 153 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 PCSK1P29120 753 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 FOXA1P55317 472 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 YBX1P67809 324 aaKnown RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 BROXQ5VW32 411 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 DLK2Q6UY11 383 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 PIM3Q86V86 326 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 OR52K2Q8NGK3 314 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 OR6P1Q8NGX9 317 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 TFB2MQ9H5Q4 396 aaKnown RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 ZFYVE28Q9HCC9 887 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 AIG1Q9NVV5 245 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 LEF1Q9UJU2 399 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 DICER1Q9UPY3 1922 aaKnown RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 WASH4PA8MWX3 477 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 BCL10O95999 233 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 MTHFD2P13995 350 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 MATN1P21941 496 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 IGFBP6P24592 240 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 CCR1P32246 355 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 NRG1Q02297 640 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 TRAF2Q12933 501 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 CRY1Q16526 586 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 EFL1Q7Z2Z2 1120 aaKnown RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 GTF3C2Q8WUA4 911 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 FCRL2Q96LA5 508 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 ATOH8Q96SQ7 321 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 NUSAP1Q9BXS6 441 aaKnown RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 NDFIP2Q9NV92 336 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 RIC8BQ9NVN3 520 aa17.56■□□□□ 0.4
SDCBP-202ENST00000413219 MARCH4Q9P2E8 410 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-202ENST00000413219 ASPDHA6ND91 283 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 GRXCR2A6NFK2 248 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 PPP6CO00743 305 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 SIX3O95343 332 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-202ENST00000413219 FUCA1P04066 466 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 POLR2IP36954 125 aaKnown RBP17.55■□□□□ 0.4
SDCBP-202ENST00000413219 RENBPP51606 427 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 LCP2Q13094 533 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 RABL3Q5HYI8 236 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 RBM48Q5RL73 367 aaKnown RBP17.55■□□□□ 0.4
SDCBP-202ENST00000413219 GPR150Q8NGU9 434 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 DNAJB14Q8TBM8 379 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 DNAJB3Q8WWF6 145 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 EXT2Q93063 718 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 BIRC7Q96CA5 298 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 FANCEQ9HB96 536 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 MAGEE1Q9HCI5 957 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 PSME2Q9UL46 239 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 ERGIC3Q9Y282 383 aa17.55■□□□□ 0.4
SDCBP-202ENST00000413219 POLR2AP24928 1970 aaKnown RBP17.54■□□□□ 0.4
SDCBP-202ENST00000413219 C9JVG2 144 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms