RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 MC2RQ01718 297 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 MARC1Q5VT66 337 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 LRRC66Q68CR7 880 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 ARHGAP22Q7Z5H3 698 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 UNC5BQ8IZJ1 945 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 NDUFAF2Q8N183 169 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 SFRP1Q8N474 314 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 ATPAF2Q8N5M1 289 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 C9orf43Q8TAL5 461 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 PIH1D2Q8WWB5 315 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 SMIM14Q96QK8 99 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 AGAP2Q99490 1192 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 SPRY4Q9C004 299 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 CNOT8Q9UFF9 292 aaKnown RBP14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 ZNHIT2Q9UHR6 403 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 ANAPC2Q9UJX6 822 aa14.16□□□□□ -0.14
HLA-DQB2-229ENST00000411527 INPP4BO15327 924 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 MAP3K6O95382 1288 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 EML2O95834 649 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 ATP1A3P13637 1013 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 IL1R2P27930 398 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 CDH6P55285 790 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 FOXK1P85037 733 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 MYL5Q02045 173 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 PTSQ03393 145 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 ITKQ08881 620 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 LRP8Q14114 963 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 DPYSL2Q16555 572 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 SMTNL2Q2TAL5 461 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 WDR74Q6RFH5 385 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 CEACAM20Q6UY09 585 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 APTXQ7Z2E3 356 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 TIPARPQ7Z3E1 657 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 KDELC2Q7Z4H8 507 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 POLNQ7Z5Q5 900 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 NLRP8Q86W28 1048 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 NCSTNQ92542 709 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 HSPH1Q92598 858 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 EFHD1Q9BUP0 239 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 NT5MQ9NPB1 228 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 MYO1AQ9UBC5 1043 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 PRKAB1Q9Y478 270 aa14.15□□□□□ -0.14
HLA-DQB2-229ENST00000411527 PYGLP06737 847 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TCF4P15884 667 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MAN1A1P33908 653 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PCK1P35558 622 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 HHEXQ03014 270 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CDC20Q12834 499 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 NFATC2Q13469 925 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 DEFB109BQ30KR1 87 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 BOLA3Q53S33 107 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZNF765Q7L2R6 523 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CHST15Q7LFX5 561 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 EXD1Q8NHP7 514 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZNF653Q96CK0 615 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ABHD17AQ96GS6 310 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 COX14Q96I36 57 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CSPG4P5Q96PW8 444 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZPBPQ9BS86 351 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RIOK2Q9BVS4 552 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 HAUS4Q9H6D7 363 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 APMAPQ9HDC9 416 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 FBXO8Q9NRD0 319 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KLHL3Q9UH77 587 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MYO6Q9UM54 1294 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SCINQ9Y6U3 715 aa14.14□□□□□ -0.15
HLA-DQB2-229ENST00000411527 A0A0J9YYE9 177 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 LRRC53A6NM62 1247 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 FZD6O60353 706 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 STK17BO94768 372 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TRBC1P01850 177 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ATP1A1P05023 1023 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RARAP10276 462 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 GZMAP12544 262 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZNF30P17039 623 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 OAS2P29728 719 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SERPINB6P35237 376 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MAPK9P45984 424 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 EPHB1P54762 984 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ABHD18Q0P651 414 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 NCAPHQ15003 741 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ASIC2Q16515 512 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 C16orf46Q6P387 395 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 IYDQ6PHW0 289 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SASS6Q6UVJ0 657 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZNF571Q7Z3V5 609 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 APOBEC4Q8WW27 367 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SH3KBP1Q96B97 665 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TRIT1Q9H3H1 467 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 STN1Q9H668 368 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MRPL47Q9HD33 250 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SARS2Q9NP81 518 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 LMBRD1Q9NUN5 540 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ANO10Q9NW15 660 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TBC1D29Q9UFV1 150 aa14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TMEM184BQ9Y519 407 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms