RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PYROXD2Q8N2H3 581 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 C20orf203Q8NBC4 194 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 DENND6BQ8NEG7 585 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 OR2L3Q8NG85 312 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 OR6J1Q8NGC5 347 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 RNASE11Q8TAA1 199 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 GPR119Q8TDV5 335 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ATG4AQ8WYN0 398 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ART4Q93070 314 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM149B1Q96BN6 582 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ALG14Q96F25 216 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 DNAJC1Q96KC8 554 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 NAA38Q9BRA0 125 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 NDEL1Q9GZM8 345 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 GPR88Q9GZN0 384 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 NUAK2Q9H093 628 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 BICC1Q9H694 974 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 CATSPERBQ9H7T0 1116 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 C10orf88Q9H8K7 445 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 DDX4Q9NQI0 724 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF331Q9NQX6 463 aaPredicted RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 CNNM1Q9NRU3 951 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 UBP1Q9NZI7 540 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 COQ3Q9NZJ6 369 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 CHPF2Q9P2E5 772 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 POLLQ9UGP5 575 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 IL20RAQ9UHF4 553 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC23A1Q9UHI7 598 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 FEZ2Q9UHY8 353 aaPredicted RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 GTF3C4Q9UKN8 822 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 GABRQQ9UN88 632 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SATB2Q9UPW6 733 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 GNEQ9Y223 722 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 PLAAQ9Y263 795 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 USH1CQ9Y6N9 552 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 U3KQK5 164 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 FREM2Q5SZK8 3169 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 PKDREJQ9NTG1 2253 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TRANK1O15050 2925 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 FMN1Q68DA7 1419 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TET1Q8NFU7 2136 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 DNAH10Q8IVF4 4471 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 A0A087WSZ3 146 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 LOC390937A0A1W2PQ73 354 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 KANSL1LA0AUZ9 987 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TRABD2BA6NFA1 517 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 H0YAA0 97 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 H3BUI4 141 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 GFYI3L273 518 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 GSTA4O15217 222 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 MARCH6O60337 910 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 GJB3O75712 270 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 S1PR2O95136 353 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 RCBTB2O95199 551 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 NADKO95544 446 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 CD74P04233 296 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 YES1P07947 543 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 HOXB5P09067 269 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRSS56P0CW18 603 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 P0DMU3 169 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM231AP0DMU4 169 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM231CP0DMU5 169 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PTPN2P17706 415 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 MAGP20916 626 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 FUT3P21217 361 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TYK2P29597 1187 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 SHMT2P34897 504 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 BTDP43251 543 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 ALDH1A3P47895 512 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 LEPRP48357 1165 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 HNRNPFP52597 415 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 COPB1P53618 953 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 DVL1P1P54792 670 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 CLDN17P56750 224 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PPIAP62937 165 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRR3P79522 188 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 SHC2P98077 582 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 KRT17Q04695 432 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PAX8Q06710 450 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 RBL2Q08999 1139 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 DRP2Q13474 957 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TUBB2AQ13885 445 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF273Q14593 569 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TRADDQ15628 312 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PFKFB3Q16875 520 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PNLIPRP3Q17RR3 467 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 C12orf74Q32Q52 190 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 LINC00483Q53H64 154 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 FASTKD1Q53R41 847 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 C2CD6Q53TS8 623 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 C5orf47Q569G3 176 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 MARCH8Q5T0T0 291 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 VWA5B1Q5TIE3 1220 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 VPS53Q5VIR6 699 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 NCR3LG1Q68D85 454 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC30A6Q6NXT4 461 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TAPT1Q6NXT6 567 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 RBM44Q6ZP01 1051 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 CCDC129Q6ZRS4 1044 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms