RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 COPS2P61201 443 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 CCL7P80098 99 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 SKOR1P84550 965 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 SQSTM1Q13501 440 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 IHHQ14623 411 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 NR1D2Q14995 579 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 TFDP3Q5H9I0 405 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 BROXQ5VW32 411 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 PDPK2PQ6A1A2 396 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 CCNJLQ8IV13 435 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 KATNAL2Q8IYT4 538 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 PELI3Q8N2H9 469 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 LPCAT1Q8NF37 534 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 ZDHHC1Q8WTX9 485 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 TFB1MQ8WVM0 346 aaKnown RBP14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 P3H4Q92791 437 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 TADA1Q96BN2 335 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 TEKT5Q96M29 485 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 DPYSL5Q9BPU6 564 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 FERMT1Q9BQL6 677 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 B3GNT4Q9C0J1 378 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 ZFYVE1Q9HBF4 777 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 ASCL3Q9NQ33 180 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 SATB2Q9UPW6 733 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 EFR3BQ9Y2G0 817 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 SHROOM3Q8TF72 1996 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 RHPN2P1A8MT19 583 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 D6RAR5 112 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 ZNF189O75820 626 aaPredicted RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 SOD1P00441 154 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 FUCA1P04066 466 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 RPLP0P05388 317 aaKnown RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 ITGA2BP08514 1039 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 TNNT3P45378 269 aaPredicted RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 GNPDA1P46926 289 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 INHBCP55103 352 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 CTBSQ01459 385 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 CDK18Q07002 472 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 BIRC2Q13490 618 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 QPCTQ16769 361 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 PYCR3Q53H96 274 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 C11orf63Q6NUN7 778 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 MFSD7Q6UXD7 560 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 ZNF438Q7Z4V0 828 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 PIM3Q86V86 326 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 NRROSQ86YC3 692 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 SCAMP4Q969E2 229 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 RBM41Q96IZ5 413 aaKnown RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 AGAP3Q96P47 875 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 RIOK2Q9BVS4 552 aaKnown RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 SPATS2LQ9NUQ6 558 aaKnown RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 TAAR2Q9P1P5 351 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 NFKBIL1Q9UBC1 381 aaPredicted RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 PCDHGA7Q9Y5G6 932 aa14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 EPN1Q9Y6I3 576 aaPredicted RBP14.45□□□□□ -0.1
NIF3L1-205ENST00000409588 A0A1W2PQM1 296 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 BTNL10A8MVZ5 291 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CDRT15L2A8MXV6 281 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 HACD1B0YJ81 288 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 B4DGG1 531 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 PLD2O14939 933 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CST8O60676 142 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CPNE6O95741 557 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 SLC2A4P14672 509 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CETN2P41208 172 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 DCDC1P59894 354 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 ZFP36L1Q07352 338 aaKnown RBP14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 ZBTB17Q13105 803 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 XRCC4Q13426 336 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 C3orf38Q5JPI3 329 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 HENMT1Q5T8I9 393 aaKnown RBP14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 ZDHHC20Q5W0Z9 365 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 KCTD16Q68DU8 428 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 TMC3Q7Z5M5 1100 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 SPRED1Q7Z699 444 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CLEC14AQ86T13 490 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 GALNT13Q8IUC8 556 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 TXLNBQ8N3L3 684 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 FBXO39Q8N4B4 442 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 AVL9Q8NBF6 648 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CCL4L1Q8NHW4 92 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 DTX3LQ8TDB6 740 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 UBE2Q2Q8WVN8 375 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 KCTD12Q96CX2 325 aaKnown RBP14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 PRR11Q96HE9 360 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 OR2M4Q96R27 311 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 TRIB3Q96RU7 358 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CMKLR1Q99788 373 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 ZSCAN5AQ9BUG6 496 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 TRABDQ9H4I3 376 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 PRORYQ9H606 182 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 GLOD4Q9HC38 313 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 AKAP7Q9P0M2 348 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 CD84Q9UIB8 345 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 RABGEF1Q9UJ41 708 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 TRHDEQ9UKU6 1024 aa14.44□□□□□ -0.1
NIF3L1-205ENST00000409588 RNF215Q9Y6U7 377 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms