RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 AQP9O43315 295 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 KPNA6O60684 536 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 PRKACGP22612 351 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 MZF1P28698 734 aaPredicted RBP12.93□□□□□ -0.34
PTPRN-202ENST00000409251 LIMK2P53671 638 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 TXNL4AP83876 142 aaKnown RBP12.93□□□□□ -0.34
PTPRN-202ENST00000409251 MEP1AQ16819 746 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 FAM72AQ5TYM5 149 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 FAM72DQ6L9T8 149 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 FAM72BQ86X60 149 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 MICU2Q8IYU8 434 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 OR52K2Q8NGK3 314 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ARNTL2Q8WYA1 636 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ESAMQ96AP7 390 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 CITED4Q96RK1 184 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ALG9Q9H6U8 611 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 NOX1Q9Y5S8 564 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 CLPXO76031 633 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 LINC00032P0C843 101 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 GRK4P32298 578 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 RPS9P46781 194 aaKnown RBP12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ECT2LQ008S8 904 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 SEMA5AQ13591 1074 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 SPCS2Q15005 226 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 MAPRE1Q15691 268 aaKnown RBP12.93□□□□□ -0.34
PTPRN-202ENST00000409251 MOGQ16653 247 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 CLEC20AQ6ZU45 233 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 TFAP2CQ92754 450 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 NCLNQ969V3 563 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 TBCDQ9BTW9 1192 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 A0A0J9YYE9 177 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 CLDN25C9JDP6 229 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 DAB1O75553 588 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 MT-CYBP00156 380 aaPredicted RBP12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ALOX12P18054 663 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 PGFP49763 221 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ACLYP53396 1101 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 NRG1Q02297 640 aaPredicted RBP12.93□□□□□ -0.34
PTPRN-202ENST00000409251 NSUN2Q08J23 767 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPRN-202ENST00000409251 NOMO2Q5JPE7 1267 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 BORAQ6PGQ7 559 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 OTOP3Q7RTS5 596 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 GALNT5Q7Z7M9 940 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 RNF180Q86T96 592 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ABHD11Q8NFV4 315 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 HM13Q8TCT9 377 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 ERGIC3Q9Y282 383 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 CRYL1Q9Y2S2 319 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 GIT1Q9Y2X7 761 aa12.93□□□□□ -0.34
PTPRN-202ENST00000409251 A0A0G2JMZ2 1700 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 BCLAF3A2AJT9 711 aaKnown RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 LRRC14BA6NHZ5 514 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 PPP6CO00743 305 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 XPNPEP2O43895 674 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 NFKB1P19838 968 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 CDH5P33151 784 aaPredicted RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 PTPN7P35236 360 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 TGFBR1P36897 503 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 NHSL2Q5HYW2 709 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 ANKRD34AQ69YU3 496 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 ALKAL1Q6UXT8 129 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 PAQR9Q6ZVX9 377 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 LRRTM3Q86VH5 581 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 PCYOX1LQ8NBM8 494 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 OR7A2PQ8NGA2 310 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 SNX19Q92543 992 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 MYLPFQ96A32 169 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 KCNA7Q96RP8 456 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 REXO4Q9GZR2 422 aaKnown RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 HMG20AQ9NP66 347 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 TNFRSF12AQ9NP84 129 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 SMPD3Q9NY59 655 aaPredicted RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 TMED5Q9Y3A6 229 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 FAM95CA0A1B0GW59 222 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 TRPC5OSA6NMA1 111 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 ERI2A8K979 691 aaKnown RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 SDHDO14521 159 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 PFDN6O15212 129 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 GPR182O15218 404 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 SIX3O95343 332 aaPredicted RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 LDLRP01130 860 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 INHAP05111 366 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 KRT8P05787 483 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 HOXD8P13378 290 aaPredicted RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 NPR3P17342 541 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 GGT5P36269 586 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 IL5RAQ01344 420 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 TICAM1Q8IUC6 712 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 LRRC52Q8N7C0 313 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 TXNDC5Q8NBS9 432 aaKnown RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 ATAD1Q8NBU5 361 aa12.92□□□□□ -0.34
PTPRN-202ENST00000409251 FAM193BQ96PV7 902 aaPredicted RBP12.92□□□□□ -0.34
PTPRN-202ENST00000409251 KCTD14Q9BQ13 255 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms