RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LIN37Q96GY3 246 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 MLPHQ9BV36 600 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 DDX56Q9NY93 547 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 DNPEPQ9ULA0 475 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 AHCTF1Q8WYP5 2266 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 CDRT15L2A8MXV6 281 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 AGRPO00253 132 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 TNFSF15O95150 251 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 ECEL1O95672 775 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 ZFXP17010 805 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 CDKN2BP42772 138 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 INHBCP55103 352 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 ODF2Q5BJF6 829 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 TMPRSS9Q7Z410 1059 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 EXD1Q8NHP7 514 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 EID2BQ96D98 161 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 IMP4Q96G21 291 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 COX14Q96I36 57 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 FCRL3Q96P31 734 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 BRD8Q9H0E9 1235 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 CNOT6Q9ULM6 557 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 PCYT1BQ9Y5K3 369 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 ALG6Q9Y672 507 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 PPP1R12AO14974 1030 aaPredicted RBP19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 ATP1A1P05023 1023 aaKnown RBP19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 HGFP14210 728 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 SPINT3P49223 89 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 B4GALNT1Q00973 533 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 ADCY2Q08462 1091 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 TAZQ16635 292 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 PYCR3Q53H96 274 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 RAB11FIP2Q7L804 512 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 NT5DC3Q86UY8 548 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 ARL14Q8N4G2 192 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 KCNE4Q8WWG9 221 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 OR2M4Q96R27 311 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 TRIB3Q96RU7 358 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 ADGRE3Q9BY15 652 aa19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 OAS3Q9Y6K5 1087 aaKnown RBP19.17■□□□□ 0.66
SMARCB1-204ENST00000407422 FADS2P1A8MWK0 482 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 PLD2O14939 933 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 B4GAT1O43505 415 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 LCA5LO95447 670 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 PIRTP0C851 137 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 ACTR1BP42025 376 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 OR1D5P58170 312 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 ACTR1AP61163 376 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 HENMT1Q5T8I9 393 aaKnown RBP19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 KAZNQ674X7 775 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 LYSMD3Q7Z3D4 306 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 NAGSQ8N159 534 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 FBXO39Q8N4B4 442 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 SPATA22Q8NHS9 363 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 CDH19Q9H159 772 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 PRKAB1Q9Y478 270 aa19.16■□□□□ 0.66
SMARCB1-204ENST00000407422 BAHCC1Q9P281 2608 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 KLK10O43240 276 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 ASMTLO95671 621 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 MT-CYBP00156 380 aaPredicted RBP19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 PYGLP06737 847 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 ITGA2BP08514 1039 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 PECAM1P16284 738 aaPredicted RBP19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 CCKBRP32239 447 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 UGT1A5P35504 534 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 MARCKSL1P49006 195 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 HADHBP55084 474 aaKnown RBP19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 CXADRP78310 365 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 ZFP36L1Q07352 338 aaKnown RBP19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 PCSK7Q16549 785 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 RAVER1Q8IY67 606 aaKnown RBP19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 TADA1Q96BN2 335 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 TMEM74Q96NL1 305 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 STRADBQ9C0K7 418 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 SLC25A51Q9H1U9 297 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 FAM83DQ9H4H8 585 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 RDH14Q9HBH5 336 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 SHOC2Q9UQ13 582 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 PCDHA13Q9Y5I0 950 aa19.15■□□□□ 0.66
SMARCB1-204ENST00000407422 RHPN2P1A8MT19 583 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 PSTPIP1O43586 416 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 CST8O60676 142 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 ALDH4A1P30038 563 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 PRKD1Q15139 912 aaPredicted RBP19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 AMZ1Q400G9 498 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 TEX44Q53QW1 395 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 SPOCD1Q6ZMY3 1216 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 ZNF438Q7Z4V0 828 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 CLEC14AQ86T13 490 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 GALNT13Q8IUC8 556 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 CCHCR1Q8TD31 782 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 SEMA6CQ9H3T2 930 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 CPNE5Q9HCH3 593 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 PKD2L2Q9NZM6 624 aa19.14■□□□□ 0.66
SMARCB1-204ENST00000407422 TMX2-CTNND1H3BSU7 103 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 PPM1DO15297 605 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 DNAJC6O75061 913 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 PTPN3P26045 913 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 NR2C2P49116 596 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 EIF3IQ13347 325 aaKnown RBP19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 COL9A2Q14055 689 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms