RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZNF335Q9H4Z2 1342 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 A0A1W2PPC1 479 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 DPPA5A6NC42 116 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 OGG1O15527 345 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZC3H11AO75152 810 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 PSG1P11464 419 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 ANXA7P20073 488 aaKnown RBP4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 PTAFRP25105 342 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 DCTDP32321 178 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 GP5P40197 560 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 ME1P48163 572 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 CCR3P51677 355 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 MRPS34P82930 218 aaKnown RBP4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 FAM27E3Q08E93 113 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 KCNC3Q14003 757 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 ODF3L2Q3SX64 289 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZNF260Q3ZCT1 412 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 IGSF11Q5DX21 431 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 TMEM198Q66K66 360 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 TRAT1Q6PIZ9 186 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 EPHX4Q8IUS5 362 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 SCYL3Q8IZE3 742 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 ADGRF4Q8IZF3 695 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 GUF1Q8N442 669 aaKnown RBP4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 DPP10Q8N608 796 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 KDM1BQ8NB78 822 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 NSMCE1Q8WV22 266 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 GAD1Q99259 594 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 NAA11Q9BSU3 229 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 C2orf40Q9H1Z8 148 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 THSD1Q9NS62 852 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 MTMR10Q9NXD2 777 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 TUBE1Q9UJT0 475 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 NFE2L3Q9Y4A8 694 aa4.98□□□□□ -1.61
HMGB1P13-201ENST00000406019 A6NL46 340 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 PLRG1O43660 514 aaKnown RBP4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 UGDHO60701 494 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 ATP2C2O75185 946 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 RECQL5O94762 991 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 TGDSO95455 350 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 CLDN7O95471 211 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 HIST1H2ABP04908 130 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 HSP90AB1P08238 724 aaKnown RBP4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 MYZAPP0CAP1 466 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 TGFB3P10600 412 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 ITGB6P18564 788 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 HIST1H2ADP20671 130 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 HOXC8P31273 242 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 DEKP35659 375 aaKnown RBP4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 KRT2P35908 639 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 ECT2LQ008S8 904 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 CAMK2DQ13557 499 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 NAE1Q13564 534 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 LPIN1Q14693 890 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 C2orf68Q2NKX9 166 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 PIK3CD-AS1Q5SR53 167 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 CST9LP1Q5W188 147 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 CES5AQ6NT32 575 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 TRILQ7L0X0 811 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 HIST3H2AQ7L7L0 130 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 TAOK1Q7L7X3 1001 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 RBFAQ8N0V3 343 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 PELI3Q8N2H9 469 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 PARP16Q8N5Y8 322 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 LRRC57Q8N9N7 239 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 TC2NQ8N9U0 490 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC44A5Q8NCS7 719 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 AFAP1L1Q8TED9 768 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 DEPDC1BQ8WUY9 529 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 EME1Q96AY2 570 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 ARSGQ96EG1 525 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 RAB3IPQ96QF0 476 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 GPATCH1Q9BRR8 931 aaKnown RBP4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 HGH1Q9BTY7 390 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 GPR88Q9GZN0 384 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 COPG2Q9UBF2 871 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 ANAPC5Q9UJX4 755 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 R3HDM2Q9Y2K5 976 aaKnown RBP4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC4A4Q9Y6R1 1079 aa4.97□□□□□ -1.61
HMGB1P13-201ENST00000406019 C1orf226A1L170 272 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 FTCDO95954 541 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 MMP3P08254 477 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 CHATP28329 748 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 TNFSF8P32971 234 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 RFC1P35251 1148 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 MMP14P50281 582 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 PLCD1P51178 756 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 GPR143P51810 404 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 SORDQ00796 357 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 CAPSQ13938 189 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 DLG2Q15700 870 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 SMTNL2Q2TAL5 461 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF805Q5CZA5 627 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 PLBD1Q6P4A8 553 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 C11orf88Q6PI97 169 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 SUSD1Q6UWL2 747 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 PQLC2Q6ZP29 291 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 DPPA4Q7L190 304 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 METTL23Q86XA0 190 aa4.96□□□□□ -1.62
HMGB1P13-201ENST00000406019 ARID3BQ8IVW6 561 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms