RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ADAMTSL4Q6UY14 1074 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 SLC22A18ASQ8N1D0 253 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 AGGF1Q8N302 714 aaeCLIP29.19■■■□□ 2.26
USP42-202ENST00000404008 TRAM1L1Q8N609 369 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 DTX3LQ8TDB6 740 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 PEX13Q92968 403 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 SKA1Q96BD8 255 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 ZNF778Q96MU6 729 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 APOOQ9BUR5 198 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 WDR26Q9H7D7 661 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 MRM3Q9HC36 420 aaKnown RBP29.19■■■□□ 2.26
USP42-202ENST00000404008 FKBPLQ9UIM3 349 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 SLC6A14Q9UN76 642 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 TMEM131Q92545 1883 aa29.19■■■□□ 2.26
USP42-202ENST00000404008 GLYATL1P3A0A0U1RQE8 302 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 A0A1B0GVT2 93 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 ESYT3A0FGR9 886 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 CCDC78A2IDD5 438 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 FADS2P1A8MWK0 482 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 GAPDHSO14556 408 aaPredicted RBP29.18■■■□□ 2.26
USP42-202ENST00000404008 LRP3O75074 770 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 SKIDA1Q1XH10 827 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 FAM151BQ6UXP7 276 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 ASCL5Q7RTU5 278 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 HEATR4Q86WZ0 1026 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 OR13J1Q8NGT2 312 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 RUBCNQ92622 972 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 ART4Q93070 314 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 FUBP1Q96AE4 644 aaKnown RBP29.18■■■□□ 2.26
USP42-202ENST00000404008 SIGLEC10Q96LC7 697 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 PWWP2AQ96N64 755 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 KIFC1Q9BW19 673 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 TEX101Q9BY14 249 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 SOX13Q9UN79 622 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 ANKRD6Q9Y2G4 727 aa29.18■■■□□ 2.26
USP42-202ENST00000404008 CCL22O00626 93 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 MAGEC1O60732 1142 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 C21orf59P57076 290 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 BNC1Q01954 994 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 SPEM2Q0P670 501 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 MSS51Q4VC12 460 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 PDPK2PQ6A1A2 396 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 DCP2Q8IU60 420 aaKnown RBP29.17■■■□□ 2.26
USP42-202ENST00000404008 PDIK1LQ8N165 341 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 SLC2A6Q9UGQ3 507 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 APPL1Q9UKG1 709 aa29.17■■■□□ 2.26
USP42-202ENST00000404008 ZFHX2Q9C0A1 2572 aaPredicted RBP29.17■■■□□ 2.26
USP42-202ENST00000404008 H7C0S8 307 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 KHNYNO15037 678 aaKnown RBP29.16■■■□□ 2.26
USP42-202ENST00000404008 HOXC4P09017 264 aaPredicted RBP29.16■■■□□ 2.26
USP42-202ENST00000404008 ZNF806P0C7X5 589 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 NXPH1P58417 271 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 XIAPP98170 497 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 CAV1Q03135 178 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 ACVR1Q04771 509 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 HIF1AQ16665 826 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 DNAJC21Q5F1R6 531 aaKnown RBP29.16■■■□□ 2.26
USP42-202ENST00000404008 TPRG1LQ5T0D9 272 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 TCEAL6Q6IPX3 200 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 CASC4Q6P4E1 433 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 TCEAL3Q969E4 200 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 CDKN2AIPNLQ96HQ2 116 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 EPB41L5Q9HCM4 733 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 CNOT6Q9ULM6 557 aaKnown RBP29.16■■■□□ 2.26
USP42-202ENST00000404008 ZNF292O60281 2723 aa29.16■■■□□ 2.26
USP42-202ENST00000404008 LRP4O75096 1905 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 PRAMEF1O95521 474 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 ARSDP51689 593 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 ARL4CP56559 192 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 KIAA1024LP59773 190 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 IRX4P78413 519 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 CDK3Q00526 305 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 DHX9Q08211 1270 aaKnown RBP29.15■■■□□ 2.26
USP42-202ENST00000404008 GRIK2Q13002 908 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 PEX6Q13608 980 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 PDE1CQ14123 709 aaPredicted RBP29.15■■■□□ 2.26
USP42-202ENST00000404008 CHRNA6Q15825 494 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 KIF19Q2TAC6 998 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 ATP13A5Q4VNC0 1218 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 ZDHHC24Q6UX98 284 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 SPATS2Q86XZ4 545 aaKnown RBP29.15■■■□□ 2.26
USP42-202ENST00000404008 LGR4Q9BXB1 951 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 NUSAP1Q9BXS6 441 aaKnown RBP29.15■■■□□ 2.26
USP42-202ENST00000404008 FSCN3Q9NQT6 498 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 PHPT1Q9NRX4 125 aaPredicted RBP29.15■■■□□ 2.26
USP42-202ENST00000404008 TREX1Q9NSU2 369 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 SAMD15Q9P1V8 674 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 DNAH14Q0VDD8 3507 aa29.15■■■□□ 2.26
USP42-202ENST00000404008 MAGEB16A2A368 324 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 SRP72O76094 671 aaKnown RBP29.14■■■□□ 2.26
USP42-202ENST00000404008 MYCLP1P12525 358 aaPredicted RBP29.14■■■□□ 2.26
USP42-202ENST00000404008 NMBRP28336 390 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 CTSKP43235 329 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 THOP1P52888 689 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 PLTPP55058 493 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 NFATC4Q14934 902 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 FBXO25Q8TCJ0 367 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 COX14Q96I36 57 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 HIC2Q96JB3 615 aa29.14■■■□□ 2.26
USP42-202ENST00000404008 TBATAQ96M53 351 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms