RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 SATB2Q9UPW6 733 aa15.77■□□□□ 0.12
ATG4B-203ENST00000400772 PCYT1BQ9Y5K3 369 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-203ENST00000400772 PMS2P1A4D2B8 440 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 RGSL1A5PLK6 1076 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 FADS2P1A8MWK0 482 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 INPP4BO15327 924 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 RPLP0P05388 317 aaKnown RBP15.76■□□□□ 0.11
ATG4B-203ENST00000400772 PNLIPP16233 465 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 GLB1P16278 677 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 ITPKBP27987 946 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 ACTN2P35609 894 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 MAZP56270 477 aaKnown RBP15.76■□□□□ 0.11
ATG4B-203ENST00000400772 ILF3Q12906 894 aaKnown RBP eCLIP15.76■□□□□ 0.11
ATG4B-203ENST00000400772 SPIDRQ14159 915 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 PCSK7Q16549 785 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 PYCR3Q53H96 274 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 LYSMD3Q7Z3D4 306 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 TMC3Q7Z5M5 1100 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 B3GNT8Q7Z7M8 397 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 ZC3H18Q86VM9 953 aaKnown RBP15.76■□□□□ 0.11
ATG4B-203ENST00000400772 TMEM139Q8IV31 216 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 Q8N9G6 341 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-203ENST00000400772 ACRBPQ8NEB7 543 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 P3H4Q92791 437 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 HAUS1Q96CS2 278 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 CRELD1Q96HD1 420 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 HERPUD2Q9BSE4 406 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 HEMGNQ9BXL5 484 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 FAM83DQ9H4H8 585 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 ZFYVE1Q9HBF4 777 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 MAGEE1Q9HCI5 957 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 LUC7LQ9NQ29 371 aaKnown RBP15.76■□□□□ 0.11
ATG4B-203ENST00000400772 UBP1Q9NZI7 540 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 PKD2L2Q9NZM6 624 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 LRIT1Q9P2V4 623 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 SHOC2Q9UQ13 582 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 OAS3Q9Y6K5 1087 aaKnown RBP15.76■□□□□ 0.11
ATG4B-203ENST00000400772 KIF26BQ2KJY2 2108 aa15.76■□□□□ 0.11
ATG4B-203ENST00000400772 BTNL10A8MVZ5 291 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 NUDT21O43809 227 aaKnown RBP15.75■□□□□ 0.11
ATG4B-203ENST00000400772 DNAJC6O75061 913 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 PIRTP0C851 137 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 CTNNA1P35221 906 aaKnown RBP15.75■□□□□ 0.11
ATG4B-203ENST00000400772 B4GALNT1Q00973 533 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 PPP2R5EQ16537 467 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 C3orf38Q5JPI3 329 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 SLC30A9Q6PML9 568 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 BBS12Q6ZW61 710 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 MARK2Q7KZI7 788 aaKnown RBP15.75■□□□□ 0.11
ATG4B-203ENST00000400772 CCNJLQ8IV13 435 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 LSMEM2Q8N112 164 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 CCHCR1Q8TD31 782 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 ZDHHC1Q8WTX9 485 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 RBM41Q96IZ5 413 aaKnown RBP15.75■□□□□ 0.11
ATG4B-203ENST00000400772 ZNF578Q96N58 590 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-203ENST00000400772 SYNDIG1Q9H7V2 258 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 ASCL3Q9NQ33 180 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
ATG4B-203ENST00000400772 PCDHA3Q9Y5H8 950 aa15.75■□□□□ 0.11
ATG4B-203ENST00000400772 CHD6Q8TD26 2715 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 LOC285095A0A1B0GVY8 99 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 D6RAR5 112 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 AURKAO14965 403 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 PJA2O43164 708 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 B4GAT1O43505 415 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 PMPCBO75439 489 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 ECEL1O95672 775 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 ATP1A1P05023 1023 aaKnown RBP15.74■□□□□ 0.11
ATG4B-203ENST00000400772 NFKB1P19838 968 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 IGF2-ASQ6U949 168 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 KDELC1Q6UW63 502 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 SPRED1Q7Z699 444 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 CCDC50Q8IVM0 306 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 NAGSQ8N159 534 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 ZNF567Q8N184 647 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 ARL14Q8N4G2 192 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 GPR26Q8NDV2 337 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 KIAA1524Q8TCG1 905 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 PATE1Q8WXA2 126 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 SLC46A1Q96NT5 459 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 QKIQ96PU8 341 aaKnown RBP eCLIP15.74■□□□□ 0.11
ATG4B-203ENST00000400772 OR2M4Q96R27 311 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 GFM1Q96RP9 751 aaKnown RBP15.74■□□□□ 0.11
ATG4B-203ENST00000400772 BAG1Q99933 345 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-203ENST00000400772 C10orf88Q9H8K7 445 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 ATXN7L1Q9ULK2 861 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-203ENST00000400772 ZNF711Q9Y462 761 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 PCDHGA8Q9Y5G5 932 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 SPO11Q9Y5K1 396 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 DSPP15924 2871 aaKnown RBP15.74■□□□□ 0.11
ATG4B-203ENST00000400772 UNC13CQ8NB66 2214 aa15.74■□□□□ 0.11
ATG4B-203ENST00000400772 A0A0U1RQJ8 604 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 GRID2IPA4D2P6 1211 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 NDST3O95803 873 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 CTNNA2P26232 953 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 ACTR1BP42025 376 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 VAV2P52735 878 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 ERVPABLB-1P60509 514 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 ACTR1AP61163 376 aa15.73■□□□□ 0.11
ATG4B-203ENST00000400772 COPS2P61201 443 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms