RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 KCTD2Q14681 263 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 UBE2UQ5VVX9 321 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 CDC73Q6P1J9 531 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 HHIPL2Q6UWX4 724 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ANGPTL8Q6UXH0 198 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ZSWIM3Q96MP5 696 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 DPY30Q9C005 99 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 C12orf65Q9H3J6 166 aaKnown RBP9.95□□□□□ -0.82
PTPRM-203ENST00000400060 RHOJQ9H4E5 214 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ACTR8Q9H981 624 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 SMOXQ9NWM0 555 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 DPP3Q9NY33 737 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 CD274Q9NZQ7 290 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 RNF6Q9Y252 685 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 NCKAP1Q9Y2A7 1128 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 RIMBP3CA6NJZ7 1639 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 RIMBP3BA6NNM3 1639 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 RIMBP3Q9UFD9 1639 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 PGLSO95336 258 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 MLYCDO95822 493 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ATAD3CQ5T2N8 411 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 CUZD1Q86UP6 607 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
PTPRM-203ENST00000400060 SLC38A4Q969I6 547 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 CHCHD6Q9BRQ6 235 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 NIPAL2Q9H841 368 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 OXSMQ9NWU1 459 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 EGFL7Q9UHF1 273 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 EDARQ9UNE0 448 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 FAM220BPB1ANY3 271 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ARPC2O15144 300 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 TGFB1I1O43294 461 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ADAM23O75077 832 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 BCAS1O75363 584 aaPredicted RBP9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ITGA10O75578 1167 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 CYP3A4P08684 503 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 C6orf141Q5SZD1 244 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 OR5H6Q8NGV6 325 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 RHOXF1Q8NHV9 184 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 TTC9Q92623 222 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 ACDQ96AP0 544 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 DHRS4Q9BTZ2 278 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
PTPRM-203ENST00000400060 TAS2R7Q9NYW3 318 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 MAN2B2Q9Y2E5 1009 aa9.95□□□□□ -0.82
PTPRM-203ENST00000400060 F8VP50 259 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 M0QZ92 97 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 PLOD3O60568 738 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 SLC22A3O75751 556 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 MIPP30301 263 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 MAGEA2P43356 314 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 PEX6Q13608 980 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 SMUG1Q53HV7 270 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 TEX44Q53QW1 395 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 INTS5Q6P9B9 1019 aaKnown RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 TXNDC11Q6PKC3 985 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CYS1Q717R9 158 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CCDC117Q8IWD4 279 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 VGLL2Q8N8G2 317 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 TRPM4Q8TD43 1214 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 UTP15Q8TED0 518 aaKnown RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 FBXL20Q96IG2 436 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 FOLH1BQ9HBA9 442 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 FANCFQ9NPI8 374 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 SH3D21A4FU49 640 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 FAM149AA5PLN7 773 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 F5H423 210 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 NDST3O95803 873 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CHRNB2P17787 502 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 PPP3CCP48454 512 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 ANKRD22Q5VYY1 191 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 PRR5LQ6MZQ0 368 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 XRRA1Q6P2D8 792 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 PSTKQ8IV42 348 aaKnown RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CADM3Q8N126 398 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 ATPAF2Q8N5M1 289 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 TTLL6Q8N841 843 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 OR13F1Q8NGS4 319 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 TTYH2Q9BSA4 534 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 GATA5Q9BWX5 397 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 MCUBQ9NWR8 336 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 RAB23Q9ULC3 237 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 OGDHLQ9ULD0 1010 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CMAHPQ9Y471 501 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 PCDHA10Q9Y5I2 948 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 C3P01024 1663 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 MYOCOSA0A1B0GUC4 107 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 AGAP5A6NIR3 686 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 NT5C1B-RDH14C9J2C7 533 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 C5orf58C9J3I9 102 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 ZNF37AP17032 561 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 RCVRNP35243 200 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 GMPRP36959 345 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 FXNQ16595 210 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 ARL13AQ5H913 290 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 DESI1Q6ICB0 168 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 MAP4K3Q8IVH8 894 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms