RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 ZFP14Q9HCL3 533 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZNF304Q9HCX3 659 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RAB6BQ9NRW1 208 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PNMA8BQ9ULN7 279 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 GNEQ9Y223 722 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 ADAM18Q9Y3Q7 739 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SPTBP11277 2137 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 IDSB3KWA1 339 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZNF879B4DU55 563 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DNM1LO00429 736 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRIM38O00635 465 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CLOCKO15516 846 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TULP3O75386 442 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 POP4O95707 220 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 PGK1P00558 417 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ITGB3P05106 788 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TMEM253P0C7T8 217 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 THRAP10827 490 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 MPIP34949 423 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FUT2Q10981 343 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PTPRCAPQ14761 206 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TIGD6Q17RP2 521 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PCID2Q5JVF3 399 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 STRA8Q7Z7C7 330 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ANKMY2Q8IV38 441 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 GLB1L3Q8NCI6 653 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLC7A6OSQ96CW6 309 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 FRMD6Q96NE9 622 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 KCTD14Q9BQ13 255 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 WDR55Q9H6Y2 383 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 TLE6Q9H808 572 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PNO1Q9NRX1 252 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 MIOSQ9NXC5 875 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 GPR83Q9NYM4 423 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZNHIT2Q9UHR6 403 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SRRM3A6NNA2 597 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 H3BNX3 289 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 UBDO15205 165 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RRP8O43159 456 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 TYMPP19971 482 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PGM1P36871 562 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 YBEYP58557 167 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 GALK2Q01415 458 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 OVGP1Q12889 678 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRAF2Q12933 501 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RAB39AQ14964 217 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 HEPACAMQ14CZ8 416 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 HERC3Q15034 1050 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 EIF4HQ15056 248 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZSCAN26Q16670 478 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RAET1GQ6H3X3 334 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DENND5AQ6IQ26 1287 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLC8B1Q6J4K2 584 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DNAJC14Q6Y2X3 702 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 ASCC1Q8N9N2 400 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 PORCNQ9H237 461 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TDRD3Q9H7E2 651 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 RXFP1Q9HBX9 757 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 GPAMQ9HCL2 828 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRIM39Q9HCM9 518 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ENY2Q9NPA8 101 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DUS2Q9NX74 493 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRPC4Q9UBN4 977 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 MAN2B2Q9Y2E5 1009 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ATG4BQ9Y4P1 393 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ACTL7BQ9Y614 415 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 NDUFB10O96000 172 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 NPPAP01160 153 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CALCAP01258 141 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CTSHP09668 335 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ALDH4A1P30038 563 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ELK3P41970 407 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 KHKP50053 298 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PLEKHN1Q494U1 663 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 NEPROQ6NW34 567 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ABRAXAS1Q6UWZ7 409 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 C16orf59Q7L2K0 433 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZNF605Q86T29 641 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZNF563Q8TA94 476 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FEZF2Q8TBJ5 459 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZNF398Q8TD17 642 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TMEM234Q8WY98 164 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 AKAP1Q92667 903 aaKnown RBP eCLIP2.72□□□□□ -1.97
CHD9-202ENST00000398510 WNT8BQ93098 351 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLAMF9Q96A28 289 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 NARS2Q96I59 477 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 TCF12Q99081 682 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TXN2Q99757 166 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 AIFM2Q9BRQ8 373 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TTYH3Q9C0H2 523 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PITHD1Q9GZP4 211 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 EPHA6Q9UF33 1036 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DDX20Q9UHI6 824 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 PAIP2BQ9ULR5 123 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 PCDHB14Q9Y5E9 798 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PTPRJQ12913 1337 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FAM92AA1XBS5 289 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 NT5C1B-RDH14C9J2C7 533 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FCHO1O14526 889 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms