RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CNOT6Q9ULM6 557 aaKnown RBP11.97□□□□□ -0.49
TFF3-202ENST00000398431 PTPN13Q12923 2485 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 DOPEY2Q9Y3R5 2298 aa11.97□□□□□ -0.49
TFF3-202ENST00000398431 GOLGA6CA6NDK9 693 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 GOLGA6BA6NDN3 693 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 EFCAB7A8K855 629 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 NKX2-8O15522 239 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 RAD1O60671 282 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 PRLP01236 227 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 GOLGA6DP0CG33 693 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 CSTF2P33240 577 aaKnown RBP eCLIP11.96□□□□□ -0.49
TFF3-202ENST00000398431 PRKCIP41743 596 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 MMP13P45452 471 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 GPLD1P80108 840 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 SKIDA1Q1XH10 827 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 MARC1Q5VT66 337 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 LRRC66Q68CR7 880 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 SASS6Q6UVJ0 657 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 TMCO3Q6UWJ1 677 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 MARK2Q7KZI7 788 aaKnown RBP11.96□□□□□ -0.49
TFF3-202ENST00000398431 TIPARPQ7Z3E1 657 aaKnown RBP11.96□□□□□ -0.49
TFF3-202ENST00000398431 SFRP1Q8N474 314 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 IL22RA1Q8N6P7 574 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 SLC37A2Q8TED4 501 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 AP2M1Q96CW1 435 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 RTP4Q96DX8 246 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 DPYSL5Q9BPU6 564 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 ASPSCR1Q9BZE9 553 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 ISCUQ9H1K1 167 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 PCDH18Q9HCL0 1135 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 GOLGA6AQ9NYA3 693 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 MYO1AQ9UBC5 1043 aa11.96□□□□□ -0.49
TFF3-202ENST00000398431 A0A0J9YYE9 177 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 LOC101059948A0A1B0GTJ6 334 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 A8MU76 341 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 DUX1O43812 170 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 DNAJC6O75061 913 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 TRBC1P01850 177 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 SKILP12757 684 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 NFKBIAP25963 317 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 ARL4AP40617 200 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 STC1P52823 247 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 CDH6P55285 790 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 POLE2P56282 527 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 MC2RQ01718 297 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 KCNAB2Q13303 367 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 BIRC2Q13490 618 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 PEX6Q13608 980 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 DCAF12Q5T6F0 453 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 USP45Q70EL2 814 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 ZNF765Q7L2R6 523 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 ZNF564Q8TBZ8 553 aaPredicted RBP11.95□□□□□ -0.5
TFF3-202ENST00000398431 FAM71BQ8TC56 605 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 HSPH1Q92598 858 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 ZNF653Q96CK0 615 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 SLC45A3Q96JT2 553 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 CTRCQ99895 268 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 RIOK2Q9BVS4 552 aaKnown RBP11.95□□□□□ -0.5
TFF3-202ENST00000398431 TSPY26PQ9H489 355 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 NT5MQ9NPB1 228 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 TUBD1Q9UJT1 453 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 PRKAB1Q9Y478 270 aa11.95□□□□□ -0.5
TFF3-202ENST00000398431 OAS3Q9Y6K5 1087 aaKnown RBP11.95□□□□□ -0.5
TFF3-202ENST00000398431 A6NCN8 305 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 INPP4BO15327 924 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 MAP3K6O95382 1288 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 CLDN7O95471 211 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
TFF3-202ENST00000398431 ARSEP51690 589 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 IGFBP7Q16270 282 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 ASIC2Q16515 512 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 ALG1LQ6GMV1 187 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 IYDQ6PHW0 289 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 WDR74Q6RFH5 385 aaPredicted RBP11.94□□□□□ -0.5
TFF3-202ENST00000398431 FAM129CQ86XR2 697 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 NRSN1Q8IZ57 195 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 UNC5BQ8IZJ1 945 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 BBS5Q8N3I7 341 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 ATPAF2Q8N5M1 289 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 CCDC112Q8NEF3 446 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 EXD1Q8NHP7 514 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 ARRDC2Q8TBH0 407 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 TEKT4Q8WW24 435 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 BTBD6Q96KE9 485 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 SLC38A3Q99624 504 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 EPN3Q9H201 632 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 MRPL47Q9HD33 250 aaKnown RBP11.94□□□□□ -0.5
TFF3-202ENST00000398431 APMAPQ9HDC9 416 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 SARS2Q9NP81 518 aaKnown RBP11.94□□□□□ -0.5
TFF3-202ENST00000398431 FBXO8Q9NRD0 319 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.94□□□□□ -0.5
TFF3-202ENST00000398431 TBC1D29Q9UFV1 150 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 CHKBQ9Y259 395 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 SCINQ9Y6U3 715 aa11.94□□□□□ -0.5
TFF3-202ENST00000398431 NBASA2RRP1 2371 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 COL12A1Q99715 3063 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 FLNCQ14315 2725 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 CLEC18AA5D8T8 446 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 ZNF891A8MT65 544 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms