RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 RPIAP49247 311 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 C6orf132Q5T0Z8 1188 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 KCTD11Q693B1 232 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 LINC00523Q86TU6 105 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 SLCO6A1Q86UG4 719 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 RBFAQ8N0V3 343 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 GALNT15Q8N3T1 639 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 RASGEF1CQ8N431 466 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 BRSK1Q8TDC3 778 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 APOLD1Q96LR9 279 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 WDR24Q96S15 920 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 BOCQ9BWV1 1114 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 LRRC40Q9H9A6 602 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 FGF22Q9HCT0 170 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 ANGPTL2Q9UKU9 493 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 DOLKQ9UPQ8 538 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 WASF3Q9UPY6 502 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 PKP3Q9Y446 797 aa14.2□□□□□ -0.14
HDDC2-202ENST00000398153 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 YY2O15391 372 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 FFAR2O15552 330 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 CEP104O60308 925 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 RFPL3O75679 317 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 AGTP01019 485 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 PIRTP0C851 137 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 ACADVLP49748 655 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 GDF10P55107 478 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 DAB2P98082 770 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 E2F1Q01094 437 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 LRP8Q14114 963 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 SIX1Q15475 284 aaPredicted RBP14.19□□□□□ -0.14
HDDC2-202ENST00000398153 TAF1AQ15573 450 aaPredicted RBP14.19□□□□□ -0.14
HDDC2-202ENST00000398153 LONRF2Q1L5Z9 754 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 ZNF569Q5MCW4 686 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 FAM182AQ5T1J6 154 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 RFLNAQ6ZTI6 216 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 RD3Q7Z3Z2 195 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 GLT6D1Q7Z4J2 308 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 CACTIN-AS1Q8N1I8 211 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 TTC30BQ8N4P2 665 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 SLC25A41Q8N5S1 370 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 GPR26Q8NDV2 337 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 OR6C4Q8NGE1 309 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 C1orf54Q8WWF1 131 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 ATG4AQ8WYN0 398 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 OR1E3Q8WZA6 343 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 PDXPQ96GD0 296 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 VPS35Q96QK1 796 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 TBL1YQ9BQ87 522 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 SPATA16Q9BXB7 569 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 CLPBQ9H078 707 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 TCEAL2Q9H3H9 227 aaPredicted RBP14.19□□□□□ -0.14
HDDC2-202ENST00000398153 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 IL17CQ9P0M4 197 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 PAK5Q9P286 719 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 NEUROG3Q9Y4Z2 214 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 SPO11Q9Y5K1 396 aa14.19□□□□□ -0.14
HDDC2-202ENST00000398153 CRTAMO95727 393 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 AP2A1O95782 977 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 BPIP17213 487 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 LPOP22079 712 aaPredicted RBP14.18□□□□□ -0.14
HDDC2-202ENST00000398153 CHRNA4P43681 627 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 ILF3Q12906 894 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDDC2-202ENST00000398153 CCDC89Q8N998 374 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 BLOC1S5Q8TDH9 187 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 GPBAR1Q8TDU6 330 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 AGAP2Q99490 1192 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 GSDMCQ9BYG8 508 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 CARS2Q9HA77 564 aaKnown RBP14.18□□□□□ -0.14
HDDC2-202ENST00000398153 TRIM39Q9HCM9 518 aa14.18□□□□□ -0.14
HDDC2-202ENST00000398153 CNOT6Q9ULM6 557 aaKnown RBP14.18□□□□□ -0.14
HDDC2-202ENST00000398153 SCN8AQ9UQD0 1980 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 EME2A4GXA9 379 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-202ENST00000398153 FADS2P1A8MWK0 482 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 F5H423 210 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-202ENST00000398153 AURKAO14965 403 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 STX7O15400 261 aaKnown RBP14.17□□□□□ -0.14
HDDC2-202ENST00000398153 SLC25A14O95258 325 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-202ENST00000398153 METTL18O95568 372 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 IFNB1P01574 187 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 CXCR5P32302 372 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 SPAM1P38567 509 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 HADHAP40939 763 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 FOXC1Q12948 553 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-202ENST00000398153 C1orf61Q13536 156 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 LAMB3Q13751 1172 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 NR0B2Q15466 257 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 SMAD1Q15797 465 aaKnown RBP14.17□□□□□ -0.14
HDDC2-202ENST00000398153 DEFB133Q30KQ1 61 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 DENND5AQ6IQ26 1287 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 OGFOD3Q6PK18 319 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 TMPRSS7Q7RTY8 843 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 TAF8Q7Z7C8 310 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 TMPRSS12Q86WS5 348 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 PHYKPLQ8IUZ5 450 aa14.17□□□□□ -0.14
HDDC2-202ENST00000398153 SLC35F6Q8N357 371 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms