RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ESCO2Q56NI9 601 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
PUM3-202ENST00000397885 TRMT1LQ7Z2T5 733 aaKnown RBP11.48□□□□□ -0.57
PUM3-202ENST00000397885 KCTD20Q7Z5Y7 419 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 P2RY8Q86VZ1 359 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 WDR49Q8IV35 697 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 KIAA0319LQ8IZA0 1049 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 METTL4Q8N3J2 472 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 CADM2Q8N3J6 435 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 FBXL6Q8N531 539 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 PLD5Q8N7P1 536 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 OR5H6Q8NGV6 325 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 HMGCLL1Q8TB92 370 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 FAM110BQ8TC76 370 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 CDHR1Q96JP9 859 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 APOBEC3GQ9HC16 384 aaKnown RBP11.48□□□□□ -0.57
PUM3-202ENST00000397885 ASNSD1Q9NWL6 643 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 TNFRSF10DQ9UBN6 386 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 PSAT1Q9Y617 370 aa11.48□□□□□ -0.57
PUM3-202ENST00000397885 H0Y626 953 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 UBDO15205 165 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 TBX1O43435 398 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 CAPN1P07384 714 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 ACTR2P61160 394 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 GPLD1P80108 840 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 PRKCDQ05655 676 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 ANO4Q32M45 955 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 HSDL1Q3SXM5 330 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 SLC39A4Q6P5W5 647 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 GDPD3Q7L5L3 318 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 PIGZQ86VD9 579 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 MCPH1Q8NEM0 835 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 MCFD2Q8NI22 146 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 GTF3C2Q8WUA4 911 aaPredicted RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 ZNF566Q969W8 418 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 NXNL1Q96CM4 212 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 C2orf40Q9H1Z8 148 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 TRIM39Q9HCM9 518 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 PAQR5Q9NXK6 330 aaPredicted RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 A0A1W2PQ72 361 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 ENPP3O14638 875 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 APOL1O14791 398 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 EXTL3O43909 919 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 INMTO95050 263 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 VNN1O95497 513 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 METTL18O95568 372 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 THRBP10828 461 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 TNNI1P19237 187 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 GRK4P32298 578 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 UGT2B10P36537 528 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 RAP1GAPP47736 663 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 ARSFP54793 590 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 SRP54P61011 504 aaKnown RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 FOXM1Q08050 763 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 FADDQ13158 208 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 SPANXN3Q5MJ09 141 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 ZBTB41Q5SVQ8 909 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 FAM205BPQ63HN1 556 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 ARID2Q68CP9 1835 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 XKRXQ6PP77 449 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 STRADAQ7RTN6 431 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 ZNF438Q7Z4V0 828 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 CMC1Q7Z7K0 106 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 WDTC1Q8N5D0 677 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 CHDHQ8NE62 594 aaPredicted RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 SPPL2BQ8TCT7 592 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 FAR1Q8WVX9 515 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 CLEC4DQ8WXI8 215 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 SEPT1Q8WYJ6 367 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 RORBQ92753 470 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 RNF170Q96K19 258 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 FEM1AQ9BSK4 669 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 TARS2Q9BW92 718 aaKnown RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 WDR6Q9NNW5 1121 aaKnown RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 EIF2B3Q9NR50 452 aaKnown RBP11.47□□□□□ -0.57
PUM3-202ENST00000397885 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 DNMT3LQ9UJW3 386 aa11.47□□□□□ -0.57
PUM3-202ENST00000397885 NME4O00746 187 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 TPST1O60507 370 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 POLBP06746 335 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 PGK2P07205 417 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 IL4RP24394 825 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 HTR2BP41595 481 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 SLC9A3P48764 834 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 SEPHS1P49903 392 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 LIG4P49917 911 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 CDH6P55285 790 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 BCAR1P56945 870 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 B2MP61769 119 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 DAG1Q14118 895 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 PGM5Q15124 567 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 ZNF404Q494X3 552 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 SYT6Q5T7P8 510 aaPredicted RBP11.46□□□□□ -0.57
PUM3-202ENST00000397885 CASC4Q6P4E1 433 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 BEND5Q7L4P6 421 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 ZBTB33Q86T24 672 aa11.46□□□□□ -0.57
PUM3-202ENST00000397885 NOXA1Q86UR1 476 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms