RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 DPF3Q92784 378 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 C12orf42Q96LP6 360 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 PANX3Q96QZ0 392 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 EMILIN2Q9BXX0 1053 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 ATP6V1HQ9UI12 483 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PDLIM1O00151 329 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 RFXANKO14593 260 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TREHO43280 583 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 HCRTO43612 131 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TSPAN1O60635 241 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 MSCO60682 206 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 DARSP14868 501 aaKnown RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TKTP29401 623 aaKnown RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 GRK3P35626 688 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 RAB27AP51159 221 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TRIQKQ629K1 86 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 ZYG11AQ6WRX3 759 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 AMER2Q8N7J2 671 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 MAB21L3Q8N8X9 362 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 UXS1Q8NBZ7 420 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 HTRA1Q92743 480 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PPP3R2Q96LZ3 170 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 GPR21Q99679 349 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TRMOQ9BU70 441 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 UNC93B1Q9H1C4 597 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 MINDY3Q9H8M7 445 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 AAASQ9NRG9 546 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 OGDHLQ9ULD0 1010 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 SPATA2Q9UM82 520 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PNMA8CA0A1B0GUJ8 204 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 UBXN8O00124 270 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TOR1BO14657 336 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TFECO14948 347 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 JAK1P23458 1154 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PTPN9P43378 593 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 LILRA4P59901 499 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 MBTD1Q05BQ5 628 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 ITGA7Q13683 1181 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 DOK6Q6PKX4 331 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 CCDC149Q6ZUS6 474 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PAGE2Q7Z2X7 111 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TRAPPC5Q8IUR0 188 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TBC1D21Q8IYX1 336 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 ENKURQ8TC29 256 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 MCRS1Q96EZ8 462 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 VPS35Q96QK1 796 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 STMN3Q9NZ72 180 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 CIDEBQ9UHD4 219 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 IKZF3Q9UKT9 509 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 A0A1W2PQH9 124 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 SNTNA6NMZ2 147 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PQBP1O60828 265 aaKnown RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 CNPP09543 421 aaKnown RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 ELNP15502 786 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 L1CAMP32004 1257 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 NUMA1Q14980 2115 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 CIR1Q86X95 450 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TREML1Q86YW5 311 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 STK40Q8N2I9 435 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 CNTD1Q8N815 330 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PCSK9Q8NBP7 692 aaKnown RBP10.73□□□□□ -0.69
CCDC40-204ENST00000397545 TADA1Q96BN2 335 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 MOCOSQ96EN8 888 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PCYT2Q99447 389 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 PDLIM7Q9NR12 457 aa10.73□□□□□ -0.69
CCDC40-204ENST00000397545 OR51F1A6NGY5 319 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RTN3O95197 1032 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 EFNA1P20827 205 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PPP2R1BP30154 601 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TALDO1P37837 337 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 SLC5A3P53794 718 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 GSCP56915 257 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ELAVL2Q12926 359 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 DDI2Q5TDH0 399 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 IL23RQ5VWK5 629 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 GALNT18Q6P9A2 607 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ZNF549Q6P9A3 640 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RPS27LQ71UM5 84 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 WDR36Q8NI36 951 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 APOLD1Q96LR9 279 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 HOPXQ9BPY8 73 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 HERPUD2Q9BSE4 406 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ACAT2Q9BWD1 397 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 FTHL17Q9BXU8 183 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 GBA3Q9H227 469 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 KLHL1Q9NR64 748 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TRNAU1APQ9NX07 287 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TOR4AQ9NXH8 423 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 KANSL3Q9P2N6 904 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 AGO1Q9UL18 857 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TBC1D30Q9Y2I9 924 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 MRPS7Q9Y2R9 242 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PCDHGC4Q9Y5F7 938 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 COPG1Q9Y678 874 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PTCH2Q9Y6C5 1203 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 G3V2T6 193 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PPEF2O14830 753 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 MYL12BO14950 172 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 EPS8Q12929 822 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms