RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 HMX2A2RU54 273 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 GOLGA8RI6L899 631 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 ITGA2BP08514 1039 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 SNRPAP09012 282 aaKnown RBP21.09■□□□□ 0.97
CPNE1-204ENST00000397443 OAS2P29728 719 aaKnown RBP21.09■□□□□ 0.97
CPNE1-204ENST00000397443 HPDP32754 393 aaPredicted RBP21.09■□□□□ 0.97
CPNE1-204ENST00000397443 SPRP35270 261 aaPredicted RBP21.09■□□□□ 0.97
CPNE1-204ENST00000397443 SUOXP51687 545 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 CACNG1Q06432 222 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 AGBL2Q5U5Z8 902 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 ACVR1CQ8NER5 493 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 NAT14Q8WUY8 206 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 VPS39Q96JC1 886 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 NELL2Q99435 816 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 RIOK2Q9BVS4 552 aaKnown RBP21.09■□□□□ 0.97
CPNE1-204ENST00000397443 OSBPL6Q9BZF3 934 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 FAM83DQ9H4H8 585 aa21.09■□□□□ 0.97
CPNE1-204ENST00000397443 MTO1Q9Y2Z2 717 aaKnown RBP21.09■□□□□ 0.97
CPNE1-204ENST00000397443 UBA6A0AVT1 1052 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-204ENST00000397443 S1PR4O95977 384 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 DCNP07585 359 aaKnown RBP21.08■□□□□ 0.97
CPNE1-204ENST00000397443 GM2AP17900 193 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 ITGALP20701 1170 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 CD151P48509 253 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 SERPINB9P50453 376 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 DGKEP52429 567 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 PGGT1BP53609 377 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 NFATC2Q13469 925 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 LGSNQ5TDP6 509 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 TAOK1Q7L7X3 1001 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 SYT13Q7L8C5 426 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 ZC3HC1Q86WB0 502 aaKnown RBP21.08■□□□□ 0.97
CPNE1-204ENST00000397443 CBARPQ8N350 705 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-204ENST00000397443 GPATCH11Q8N954 259 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 PJA1Q8NG27 643 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 GPR150Q8NGU9 434 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 ZNF398Q8TD17 642 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 NDNQ99608 321 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 STMN4Q9H169 189 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-204ENST00000397443 CAB39LQ9H9S4 337 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 CRLS1Q9UJA2 301 aa21.08■□□□□ 0.97
CPNE1-204ENST00000397443 DOCK9Q9BZ29 2069 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 IGLON5A6NGN9 336 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 CHURC1-FNTBB4DL54 471 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 H0Y858 1186 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 WNT9AO14904 365 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 RECQL5O94762 991 aaPredicted RBP21.08■□□□□ 0.96
CPNE1-204ENST00000397443 CREB1P16220 341 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 LIMK2P53671 638 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 ZXDAP98168 799 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 CCDC15Q0P6D6 951 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 RASA2Q15283 850 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 TMEM52BQ4KMG9 183 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 ATP13A5Q4VNC0 1218 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 SEL1L3Q68CR1 1132 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 KIAA0408Q6ZU52 694 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 C4orf33Q8N1A6 199 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 KLK6Q92876 244 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 NCKAP1Q9Y2A7 1128 aa21.08■□□□□ 0.96
CPNE1-204ENST00000397443 HMGB1P1B2RPK0 211 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-204ENST00000397443 OR1I1O60431 355 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 NDUFS3O75489 264 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 MT-ND3P03897 115 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 ATP5DP30049 168 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 LEPRP48357 1165 aaKnown RBP21.07■□□□□ 0.96
CPNE1-204ENST00000397443 CSE1LP55060 971 aaKnown RBP21.07■□□□□ 0.96
CPNE1-204ENST00000397443 SNX20Q7Z614 316 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 TECPR1Q7Z6L1 1165 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 TRABD2AQ86V40 505 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 EXOC3L1Q86VI1 746 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 SERPINA9Q86WD7 417 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 LMNTD2Q8IXW0 634 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 DCLK2Q8N568 766 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 TSTD1Q8NFU3 115 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 MZB1Q8WU39 189 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.07■□□□□ 0.962e-6■■■■■ 26.8
CPNE1-204ENST00000397443 TLCD1Q96CP7 247 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 CCDC97Q96F63 343 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-204ENST00000397443 SERAC1Q96JX3 654 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 COQ10AQ96MF6 247 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 PLEKHG4BQ96PX9 1271 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 RHOJQ9H4E5 214 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 SLC39A10Q9ULF5 831 aa21.07■□□□□ 0.96
CPNE1-204ENST00000397443 ATG13O75143 517 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 PDGFBP01127 241 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-204ENST00000397443 OGNP20774 298 aaKnown RBP21.06■□□□□ 0.96
CPNE1-204ENST00000397443 ADPRHP54922 357 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 ZBTB16Q05516 673 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 AP2M1Q96CW1 435 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 NUS1Q96E22 293 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 SIT1Q9Y3P8 196 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 ZNF106Q9H2Y7 1883 aaKnown RBP21.06■□□□□ 0.96
CPNE1-204ENST00000397443 BDP1A6H8Y1 2624 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3DA0A087WVF3 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3IA0A087WXS9 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3EA0A087X179 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3KA0A087X1G2 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3FA6NER0 549 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3LB9A6J9 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 PSMD11O00231 422 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms