RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PCNX2A6NKB5 2137 aa21.08■□□□□ 0.96
TSPAN4-206ENST00000397408 FADS2P1A8MWK0 482 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 RASGRP1O95267 797 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 KCNK5O95279 499 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 APRTP07741 180 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 HK3P52790 923 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 ETF1P62495 437 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 BASP1P80723 227 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 TAF1AQ15573 450 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 TRIP13Q15645 432 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 DOK6Q6PKX4 331 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 C4orf22Q6V702 233 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 DGLUCYQ7Z3D6 616 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 LINC00523Q86TU6 105 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 CREG2Q8IUH2 290 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 LRRC61Q9BV99 259 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 MRPL40Q9NQ50 206 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.07■□□□□ 0.961e-6■■■■□ 22.7
TSPAN4-206ENST00000397408 MOSPD1Q9UJG1 213 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 PKP3Q9Y446 797 aa21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 ARID1BQ8NFD5 2236 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-206ENST00000397408 GIPC1O14908 333 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 SCAMP1O15126 338 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 FFAR2O15552 330 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 CBFA2T3O75081 653 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 FNTAP49354 379 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 VPS41P49754 854 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 BLKP51451 505 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 MSLNQ13421 630 aaPredicted RBP21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 PRRT3Q5FWE3 981 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 PPM1JQ5JR12 505 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 SLC25A45Q8N413 288 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 TRAM1L1Q8N609 369 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 EID2Q8N6I1 236 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 OR52K1Q8NGK4 314 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 LMX1AQ8TE12 382 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 HIC2Q96JB3 615 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 PLEKHG4BQ96PX9 1271 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 ZSCAN5AQ9BUG6 496 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 FRMD8Q9BZ67 464 aaPredicted RBP21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 SPASTQ9UBP0 616 aa21.06■□□□□ 0.96
TSPAN4-206ENST00000397408 PRSS38A1L453 326 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 C2orf81A6NN90 581 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 TNFRSF10CO14798 259 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 STX7O15400 261 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 AQP9O43315 295 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 SUN1O94901 812 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 CRTAMO95727 393 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 KRT14P02533 472 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 CEACAM1P13688 526 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 TPH1P17752 444 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 LPOP22079 712 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 CASQ1P31415 396 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 SPAM1P38567 509 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 C1orf61Q13536 156 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 PTPRCAPQ14761 206 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 TCEA2Q15560 299 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 SYT10Q6XYQ8 523 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 PPP1R21Q6ZMI0 780 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 DNAAF3Q8N9W5 541 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 BAHD1Q8TBE0 780 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 BRSK1Q8TDC3 778 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 COX14Q96I36 57 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 SUDS3Q9H7L9 328 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 CYP4F12Q9HCS2 524 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 CNOT6Q9ULM6 557 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 KCTD3Q9Y597 815 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 DGKBQ9Y6T7 804 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 MYLKQ15746 1914 aa21.05■□□□□ 0.96
TSPAN4-206ENST00000397408 PPFIA2O75334 1257 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 TNFP01375 233 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CEACAM5P06731 702 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 SEPT6Q14141 434 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 POU6F1Q14863 301 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 ZDHHC20Q5W0Z9 365 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 OR4K2Q8NGD2 314 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 TRIM44Q96DX7 344 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 TBATAQ96M53 351 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 DDX47Q9H0S4 455 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 IL26Q9NPH9 171 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 EIF2B3Q9NR50 452 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 SLC17A4Q9Y2C5 497 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 TMEM98Q9Y2Y6 226 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 SPAARA0A1B0GVQ0 90 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 NEMP2A6NFY4 417 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CELA2BP08218 269 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CTSEP14091 401 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 GRIA1P42261 906 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 POLD2P49005 469 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 ZNF140P52738 457 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CDH17Q12864 832 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 GPS1Q13098 491 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 PDPK2PQ6A1A2 396 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 FAM151BQ6UXP7 276 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 GRK7Q8WTQ7 553 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 PTCD2Q8WV60 388 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 C16orf45Q96MC5 204 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CDC6Q99741 560 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CARS2Q9HA77 564 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 FTSJ1Q9UET6 329 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms