RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 C13orf42A0A1B0GVH6 325 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CAMTA2O94983 1202 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 VIPP01282 170 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 GRIK4Q16099 956 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 PHYKPLQ8IUZ5 450 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 PHC3Q8NDX5 983 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 TRAPPC12Q8WVT3 735 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 MTMR8Q96EF0 704 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 ZSWIM3Q96MP5 696 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 KCNF1Q9H3M0 494 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CERS4Q9HA82 394 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 ADGRE2Q9UHX3 823 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 FBXW2Q9UKT8 454 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 HSPA12AO43301 675 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 NFIXQ14938 502 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CDK10Q15131 360 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 AMZ1Q400G9 498 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 SPDYCQ5MJ68 293 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CHSY3Q70JA7 882 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 NETO2Q8NC67 525 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 TMEM161BQ8NDZ6 487 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 DPEP2Q9H4A9 486 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 LDAHQ9H6V9 325 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 RRAGCQ9HB90 399 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CENPMQ9NSP4 180 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 UPB1Q9UBR1 384 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 RSL24D1Q9UHA3 163 aaKnown RBP12.31□□□□□ -0.44
SMU1-201ENST00000397149 RAPGEFL1Q9UHV5 662 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 PDE2AO00408 941 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 TBX1O43435 398 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 IPO13O94829 963 aaKnown RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 ELFN1P0C7U0 828 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 TFEBP19484 476 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 SCNN1GP51170 649 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 S100A12P80511 92 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 SLC10A7Q0GE19 358 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 TMC8Q8IU68 726 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 C10orf107Q8IVU9 208 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 INO80EQ8NBZ0 244 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 OR5T2Q8NGG2 359 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 OR6K6Q8NGW6 343 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 C2orf49Q9BVC5 232 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 FBXO9Q9UK97 447 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 CLEC3AO75596 197 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 APOL3O95236 402 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 PGRP06401 933 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 TAL1P17542 331 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 PTPRNQ16849 979 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 NEPROQ6NW34 567 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 RAB43Q86YS6 212 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 CRYBG2Q8N1P7 616 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 TC2NQ8N9U0 490 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 OR7D4Q8NG98 312 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 LPIN3Q9BQK8 851 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 ZYG11BQ9C0D3 744 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 MEMO1Q9Y316 297 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 ASXL2Q76L83 1435 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 FAM237BA0A1B0GVD1 139 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 HNRNPLP14866 589 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMU1-201ENST00000397149 CYP11B2P19099 503 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 RBL1P28749 1068 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 GRIA4P48058 902 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 ZC3H12AQ5D1E8 599 aaKnown RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 RAB12Q6IQ22 244 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 FRMD7Q6ZUT3 714 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 KLHL15Q96M94 604 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 RHPN2P1A8MT19 583 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 A8MUA0 341 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 EIF1AYO14602 144 aaKnown RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 TPPPO94811 219 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 C22orf31O95567 290 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 ARP10275 920 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 FAM76BQ5HYJ3 339 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 XKRXQ6PP77 449 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 NXPE2Q96DL1 559 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 RIT2Q99578 217 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 TCF7L1Q9HCS4 588 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 STOX2Q9P2F5 926 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 NR2E3Q9Y5X4 410 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 EIF2AK4Q9P2K8 1649 aaKnown RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 NEDD8-MDP1E9PL57 170 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 PSMG1O95456 288 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 TUFMP49411 452 aaKnown RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 RPL6Q02878 288 aaKnown RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 C15orf59Q2T9L4 293 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 TNFAIP8L3Q5GJ75 292 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 PRR23BQ6ZRT6 265 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 GPRIN3Q6ZVF9 776 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 TBC1D15Q8TC07 691 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 LENG9Q96B70 501 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 LINGO1Q96FE5 620 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 ZNF180Q9UJW8 692 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 REXO2Q9Y3B8 237 aaKnown RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 SLC37A4O43826 429 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 PIAS1O75925 651 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 CLPXO76031 633 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 CDK16Q00536 496 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 SIM2Q14190 667 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms