RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 ZHX3Q9H4I2 956 aa4.1□□□□□ -1.75
CMC1-202ENST00000396610 ZNF556Q9HAH1 456 aa4.1□□□□□ -1.75
CMC1-202ENST00000396610 PCDH9Q9HC56 1237 aa4.1□□□□□ -1.75
CMC1-202ENST00000396610 EHD2Q9NZN4 543 aa4.1□□□□□ -1.75
CMC1-202ENST00000396610 CORO1CQ9ULV4 474 aaPredicted RBP4.1□□□□□ -1.75
CMC1-202ENST00000396610 AMDHD2Q9Y303 409 aa4.1□□□□□ -1.75
CMC1-202ENST00000396610 LOXL2Q9Y4K0 774 aa4.1□□□□□ -1.75
CMC1-202ENST00000396610 TDRD9Q8NDG6 1382 aaKnown RBP4.1□□□□□ -1.75
CMC1-202ENST00000396610 IGHV4OR15-8A0A075B7B6 117 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 DENND3A2RUS2 1198 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 PI4KAP2A4QPH2 592 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 GOLGA6L9A6NEM1 432 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 PRAC2D3DTV9 90 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 H3BQ06 376 aaPredicted RBP4.09□□□□□ -1.75
CMC1-202ENST00000396610 TULP2O00295 520 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 ATP2A1O14983 1001 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 HCRTR2O43614 444 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 SH3BP5O60239 455 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 WDHD1O75717 1129 aaPredicted RBP4.09□□□□□ -1.75
CMC1-202ENST00000396610 HLA-DOBP13765 273 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 ITGA2P17301 1181 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 CAPN3P20807 821 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 S1PR1P21453 382 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 UBA1P22314 1058 aaKnown RBP4.09□□□□□ -1.75
CMC1-202ENST00000396610 CORO1AP31146 461 aaKnown RBP4.09□□□□□ -1.75
CMC1-202ENST00000396610 MAPK4P31152 587 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 ARL3P36405 182 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.75
CMC1-202ENST00000396610 NIPAL4Q0D2K0 466 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 SFR1Q86XK3 245 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 NGEFQ8N5V2 710 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 BBS10Q8TAM1 723 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 SLC20A1Q8WUM9 679 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 SORCS1Q8WY21 1168 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 ZKSCAN4Q969J2 545 aaPredicted RBP4.09□□□□□ -1.75
CMC1-202ENST00000396610 DUX5Q96PT3 197 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 MTERF1Q99551 399 aaKnown RBP4.09□□□□□ -1.75
CMC1-202ENST00000396610 PKP4Q99569 1192 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 PIGMQ9H3S5 423 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 PDZD7Q9H5P4 517 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 EBF2Q9HAK2 575 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 LTB4R2Q9NPC1 389 aa4.09□□□□□ -1.75
CMC1-202ENST00000396610 DOCK7Q96N67 2140 aa4.09□□□□□ -1.76
CMC1-202ENST00000396610 PRSS44E7EML9 344 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 F5H0A9 414 aaPredicted RBP4.08□□□□□ -1.76
CMC1-202ENST00000396610 SPINT2O43291 252 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 BUB3O43684 328 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 NDUFS3O75489 264 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 KCNK5O95279 499 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 ACADMP11310 421 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 PPARGP37231 505 aaPredicted RBP4.08□□□□□ -1.76
CMC1-202ENST00000396610 RXRGP48443 463 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 EIF4A2Q14240 407 aaKnown RBP4.08□□□□□ -1.76
CMC1-202ENST00000396610 PDS5AQ29RF7 1337 aaKnown RBP4.08□□□□□ -1.76
CMC1-202ENST00000396610 FAM76BQ5HYJ3 339 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 LRIF1Q5T3J3 769 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 GKAP1Q5VSY0 366 aaPredicted RBP4.08□□□□□ -1.76
CMC1-202ENST00000396610 GFRALQ6UXV0 394 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 UNQ6126/PRO20091Q6UXV3 157 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 IKBIPQ70UQ0 350 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 NR2C2APQ86WQ0 139 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 TMEM219Q86XT9 240 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 NRROSQ86YC3 692 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 C1orf87Q8N0U7 546 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 WDTC1Q8N5D0 677 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 APBB2Q92870 758 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 ELMOD3Q96FG2 381 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 CWC15Q9P013 229 aaKnown RBP4.08□□□□□ -1.76
CMC1-202ENST00000396610 COPG2Q9UBF2 871 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 PCDHAC2Q9Y5I4 1007 aa4.08□□□□□ -1.76
CMC1-202ENST00000396610 EME2A4GXA9 379 aaPredicted RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 IFITM10A6NMD0 228 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 A8MZ25 164 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 M0QZ24 198 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 JRKO75564 520 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 DDX58O95786 925 aaKnown RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 RARGP13631 454 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 MYOD1P15172 320 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 CDH2P19022 906 aaPredicted RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 UBA7P41226 1012 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 PIK3CAP42336 1068 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 FASLGP48023 281 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 ILF3Q12906 894 aaKnown RBP eCLIP4.07□□□□□ -1.766e-6■■□□□ 11.4
CMC1-202ENST00000396610 MAD2L1Q13257 205 aaPredicted RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 PNLIPRP3Q17RR3 467 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 ASTE1Q2TB18 679 aaPredicted RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 ZNF718Q3SXZ3 478 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 DCST1Q5T197 706 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 BRAT1Q6PJG6 821 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 GLDNQ6ZMI3 551 aaPredicted RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 TUBA1AQ71U36 451 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 SDCCAG8Q86SQ7 713 aaPredicted RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 NAGSQ8N159 534 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 KBTBD3Q8NAB2 608 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 MAGEC3Q8TD91 643 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 SLC38A5Q8WUX1 472 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 ABTB1Q969K4 478 aaPredicted RBP4.07□□□□□ -1.76
CMC1-202ENST00000396610 TAAR8Q969N4 342 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 EGLN2Q96KS0 407 aa4.07□□□□□ -1.76
CMC1-202ENST00000396610 TUBA1CQ9BQE3 449 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms