RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 RHOT2Q8IXI1 618 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 CCNYQ8ND76 341 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 ZDHHC1Q8WTX9 485 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 RNF25Q96BH1 459 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-206ENST00000395795 CCDC42Q96M95 316 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 GSDMCQ9BYG8 508 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 SEMA6CQ9H3T2 930 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 DEF6Q9H4E7 631 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 ACSL6Q9UKU0 697 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 INTUQ9ULD6 942 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 TFR2Q9UP52 801 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 TTLL3Q9Y4R7 772 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 PCDHGA7Q9Y5G6 932 aa16.08■□□□□ 0.16
CXCL12-206ENST00000395795 KLK10O43240 276 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 LCA5LO95447 670 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 COMTP21964 271 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 CD1CP29017 333 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 RBMS1P29558 406 aaKnown RBP16.07■□□□□ 0.16
CXCL12-206ENST00000395795 CDKN2BP42772 138 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 HADHBP55084 474 aaKnown RBP16.07■□□□□ 0.16
CXCL12-206ENST00000395795 CXADRP78310 365 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 ILF3Q12906 894 aaKnown RBP eCLIP16.07■□□□□ 0.16
CXCL12-206ENST00000395795 GPR155Q7Z3F1 870 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 FBXO39Q8N4B4 442 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 OR2M4Q96R27 311 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 NUDT22Q9BRQ3 303 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 DPH1Q9BZG8 443 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 GOLPH3Q9H4A6 298 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 RDH14Q9HBH5 336 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 EPB41L5Q9HCM4 733 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 ZNHIT6Q9NWK9 470 aaKnown RBP16.07■□□□□ 0.16
CXCL12-206ENST00000395795 SAE1Q9UBE0 346 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-206ENST00000395795 HEY1Q9Y5J3 304 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
CXCL12-206ENST00000395795 TEX51A0A1B0GUA7 166 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 A6NCN8 305 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 GOLGA6CA6NDK9 693 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 APOL1O14791 398 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 INPP4BO15327 924 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 KRT1P04264 644 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 ATP1A1P05023 1023 aaKnown RBP16.06■□□□□ 0.16
CXCL12-206ENST00000395795 GOLGA6DP0CG33 693 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 PECAM1P16284 738 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-206ENST00000395795 ITIH1P19827 911 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 SLC5A2P31639 672 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 CSF2RBP32927 897 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 CD68P34810 354 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-206ENST00000395795 MARCKSL1P49006 195 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 ARSDP51689 593 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 EPHB1P54762 984 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 EIF3IQ13347 325 aaKnown RBP16.06■□□□□ 0.16
CXCL12-206ENST00000395795 SQSTM1Q13501 440 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 GALNT3Q14435 633 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 C16orf72Q14CZ0 275 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 PRKD1Q15139 912 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-206ENST00000395795 FOXR1Q6PIV2 292 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 LYSMD3Q7Z3D4 306 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 KIAA1524Q8TCG1 905 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 TMEM74Q96NL1 305 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 GOLGA6AQ9NYA3 693 aa16.06■□□□□ 0.16
CXCL12-206ENST00000395795 C1orf232A0A0U1RR37 186 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-206ENST00000395795 KRT10P13645 584 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 PTPN3P26045 913 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 ACTR1BP42025 376 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 SLC1A1P43005 524 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 ACTR1AP61163 376 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 WASHC5Q12768 1159 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 SRSF6Q13247 344 aaKnown RBP16.05■□□□□ 0.16
CXCL12-206ENST00000395795 PDK1Q15118 436 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 SLC14A2Q15849 920 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 MARK2Q7KZI7 788 aaKnown RBP16.05■□□□□ 0.16
CXCL12-206ENST00000395795 CNGA4Q8IV77 575 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 NDUFAF2Q8N183 169 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 GPR26Q8NDV2 337 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 EXD1Q8NHP7 514 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 SPATA22Q8NHS9 363 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 TTC9Q92623 222 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 MLPHQ9BV36 600 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-206ENST00000395795 SLC25A51Q9H1U9 297 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 VPS18Q9P253 973 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 TMPRSS11EQ9UL52 423 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 DNPEPQ9ULA0 475 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 PRKAB1Q9Y478 270 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 LOXL2Q9Y4K0 774 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 SPO11Q9Y5K1 396 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
CXCL12-206ENST00000395795 ZFC3H1O60293 1989 aaKnown RBP16.05■□□□□ 0.16
CXCL12-206ENST00000395795 IGHV5-10-1A0A0J9YXX1 117 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 PRR19A6NJB7 356 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 C9orf172C9J069 976 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 TMX2-CTNND1H3BSU7 103 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 CPNE6O95741 557 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 MT-CYBP00156 380 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-206ENST00000395795 PYGLP06737 847 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 PIRTP0C851 137 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 TMPRSS3P57727 454 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 AP1B1Q10567 949 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 TGIF1Q15583 401 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms