RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 TM7SF2O76062 418 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 PAK4O96013 591 aaPredicted RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 SERPINC1P01008 464 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ESR1P03372 595 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 SERPING1P05155 500 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 CYP1A2P05177 515 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 CKMT1AP12532 417 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ERCC2P18074 760 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 SERPINA4P29622 427 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 MIPP30301 263 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 HSPA9P38646 679 aaKnown RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 MMP12P39900 470 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 PEX5P50542 639 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 DUSP3P51452 185 aaPredicted RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 DNA2P51530 1060 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 AP1S1P61966 158 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 E2F1Q01094 437 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 SGCGQ13326 291 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 IKZF1Q13422 519 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 PIGHQ14442 188 aaPredicted RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 RTP5Q14D33 572 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 CYTH1Q15438 398 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 CA9Q16790 459 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 UGP2Q16851 508 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 BOLA3Q53S33 107 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 HS1BP3Q53T59 392 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ATXN7L2Q5T6C5 722 aaPredicted RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ZCCHC8Q6NZY4 707 aaKnown RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 MACC1Q6ZN28 852 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 VPS36Q86VN1 386 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 LRRC49Q8IUZ0 686 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 TP53INP2Q8IXH6 220 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 EID2Q8N6I1 236 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 DCBLD1Q8N8Z6 715 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 TP53I13Q8NBR0 393 aaPredicted RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ZNF548Q8NEK5 533 aaPredicted RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 BTN2A2Q8WVV5 523 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 FATE1Q969F0 183 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ZNF653Q96CK0 615 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 GRAMD1AQ96CP6 724 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 NXPE2Q96DL1 559 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 KLHL32Q96NJ5 620 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 CALN1Q9BXU9 219 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 TRIM7Q9C029 511 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 PRDM14Q9GZV8 571 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 DHX35Q9H5Z1 703 aaKnown RBP6.17□□□□□ -1.42
PTPN20-208ENST00000395727 FZD3Q9NPG1 666 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 KCTD5Q9NXV2 234 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 AMACRQ9UHK6 382 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 NENFQ9UMX5 172 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 ACTL7AQ9Y615 435 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 CACNA1BQ00975 2339 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 AKAP13Q12802 2813 aa6.17□□□□□ -1.42
PTPN20-208ENST00000395727 COL27A1Q8IZC6 1860 aaPredicted RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 LY6G6EA0A0G2JKS1 128 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 SYCE3A1L190 88 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 IGLON5A6NGN9 336 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 ZNF487B1APH4 448 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 GOLGA6L19H0YKK7 550 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 J3KR12 359 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 TRIM38O00635 465 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 NEMP1O14524 444 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 TRAFD1O14545 582 aaPredicted RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 SMAD7O15105 426 aaKnown RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 HTRA2O43464 458 aaPredicted RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 SIGLEC6O43699 453 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 SOCS5O75159 536 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 GYPCP04921 128 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 TPM3P06753 285 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 HOXC4P09017 264 aaPredicted RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 CR2P20023 1033 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 IL1R2P27930 398 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 TPP2P29144 1249 aaPredicted RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 GKP32189 559 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 SERPINB6P35237 376 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 IGFALSP35858 605 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 ARL4AP40617 200 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 PAPOLAP51003 745 aaKnown RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 BLKP51451 505 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 RENBPP51606 427 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 UBASH3AP57075 661 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 CLDN2P57739 230 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 POLR2LP62875 67 aaKnown RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 SLC25A11Q02978 314 aaKnown RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 EIF2B5Q13144 721 aaKnown RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 DNAJC3Q13217 504 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 MTM1Q13496 603 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 TRIM14Q14142 442 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 PTK2BQ14289 1009 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 PPP2R5EQ16537 467 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 SKOR2Q2VWA4 1001 aaPredicted RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 BBS9Q3SYG4 887 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 TDRD12Q587J7 1177 aaKnown RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 PRAMEF14Q5SWL7 426 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 HES3Q5TGS1 186 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 ERAP2Q6P179 960 aa6.16□□□□□ -1.42
PTPN20-208ENST00000395727 ALKBH5Q6P6C2 394 aaKnown RBP6.16□□□□□ -1.42
PTPN20-208ENST00000395727 LVRNQ6Q4G3 990 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms