RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SCNN1BP51168 640 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ARFIP2P53365 341 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 PRKAA2P54646 552 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 TAF1AQ15573 450 aaPredicted RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 TSNAXIP1Q2TAA8 658 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 CNSTQ6PJW8 725 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ZYG11AQ6WRX3 759 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ASRGL1Q7L266 308 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 CRLF3Q8IUI8 442 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 THOC1Q96FV9 657 aaKnown RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 NELL2Q99435 816 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 SORT1Q99523 831 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 C19orf43Q9BQ61 176 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 TNKS2Q9H2K2 1166 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 STN1Q9H668 368 aaKnown RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 LMAN1LQ9HAT1 526 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 KCTD3Q9Y597 815 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 SPO11Q9Y5K1 396 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ARL5AQ9Y689 179 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ZNF106Q9H2Y7 1883 aaKnown RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 CFAP73A6NFT4 308 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 TMEM114B3SHH9 223 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 PHGDHO43175 533 aaKnown RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 ATP5HO75947 161 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 KLHL2O95198 593 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 RALBP11234 206 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 HNRNPLP14866 589 aaKnown RBP eCLIP15.07■□□□□ 01e-8■■□□□ 12.8
SCAF11-204ENST00000395454 RHOAP61586 193 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 AP1S1P61966 158 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 PRAMEP78395 509 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 LRRC32Q14392 662 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 E2F5Q15329 346 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 HSF5Q4G112 596 aaPredicted RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 DGKKQ5KSL6 1271 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 C22orf39Q6P5X5 142 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 Q6ZS52 159 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 Q6ZVU0 165 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 CLNKQ7Z7G1 428 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ZNF687Q8N1G0 1237 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 IL17RCQ8NAC3 791 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 TXNDC5Q8NBS9 432 aaKnown RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 BLOC1S5Q8TDH9 187 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 KCNV2Q8TDN2 545 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ERLEC1Q96DZ1 483 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 DNAJC1Q96KC8 554 aaKnown RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 TMEM120AQ9BXJ8 343 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 ADGRE3Q9BY15 652 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 TMEM245Q9H330 911 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 MTG2Q9H4K7 406 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 SAR1AQ9NR31 198 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 OXSMQ9NWU1 459 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 MARCH4Q9P2E8 410 aaPredicted RBP15.07■□□□□ 0
SCAF11-204ENST00000395454 DCTN4Q9UJW0 460 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 RAI2Q9Y5P3 530 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 STON1Q9Y6Q2 735 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 CAPN7Q9Y6W3 813 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 USP34Q70CQ2 3546 aa15.07■□□□□ 0
SCAF11-204ENST00000395454 SCN8AQ9UQD0 1980 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 MUC22E2RYF6 1773 aaPredicted RBP15.06■□□□□ 0
SCAF11-204ENST00000395454 NPC1O15118 1278 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 ZNF821O75541 412 aaPredicted RBP15.06■□□□□ 0
SCAF11-204ENST00000395454 KLF8O95600 359 aaPredicted RBP15.06■□□□□ 0
SCAF11-204ENST00000395454 EPHX1P07099 455 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 ARRB2P32121 409 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 SLC1A6P48664 564 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 SUOXP51687 545 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 IRX4P78413 519 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 MRPS21P82921 87 aaKnown RBP15.06■□□□□ 0
SCAF11-204ENST00000395454 TRAF2Q12933 501 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 ZNF789Q5FWF6 425 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 SDE2Q6IQ49 451 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 ZCCHC23Q6ZST2 131 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 TRIM67Q6ZTA4 783 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 RAPH1Q70E73 1250 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 TRMT11Q7Z4G4 463 aaKnown RBP15.06■□□□□ 0
SCAF11-204ENST00000395454 C10orf67Q8IYJ2 551 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 KDM1BQ8NB78 822 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 PJA1Q8NG27 643 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 PIWIL2Q8TC59 973 aaKnown RBP15.06■□□□□ 0
SCAF11-204ENST00000395454 TSPAN17Q96FV3 270 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 UBXN10Q96LJ8 280 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 TBATAQ96M53 351 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 CEP44Q9C0F1 390 aa15.06■□□□□ 0
SCAF11-204ENST00000395454 FBXO6Q9NRD1 293 aaPredicted RBP15.06■□□□□ 0
SCAF11-204ENST00000395454 A0A0G2JND7 137 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 CCDC162PA2VCL2 907 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 ANKRD66B4E2M5 251 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 PDGFBP01127 241 aaPredicted RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 MYL2P10916 166 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 NTSR1P30989 418 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 VASPP50552 380 aaPredicted RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 RPL26P61254 145 aaKnown RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 DLG1Q12959 904 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 RBM20Q5T481 1227 aaKnown RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 ATXN7L2Q5T6C5 722 aaPredicted RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 MRNIPQ6NTE8 343 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 RYBPQ8N488 228 aaPredicted RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 PCDH20Q8N6Y1 951 aaKnown RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 OR6K2Q8NGY2 324 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 FRS2Q8WU20 508 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms