RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SLC1A2P43004 574 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 MAGEA8P43361 318 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 LIMK2P53671 638 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PRAMEP78395 509 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 NSUN2Q08J23 767 aaKnown RBP eCLIP6.94□□□□□ -1.3
RTN4-205ENST00000394609 DNAJC3Q13217 504 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PDE1CQ14123 709 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 UBAP2LQ14157 1087 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 GRM3Q14832 879 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 RAB30Q15771 203 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 MUM1Q2TAK8 710 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 LRRC23Q53EV4 343 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 TCEAL5Q5H9L2 206 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 KIAA0930Q6ICG6 404 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 C16orf46Q6P387 395 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TMEM154Q6P9G4 183 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TIFABQ6ZNK6 161 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 FAM47EQ6ZV65 393 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 GET4Q7L5D6 327 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 ZC3HC1Q86WB0 502 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 CELF5Q8N6W0 485 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 PAF1Q8N7H5 531 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 EFHBQ8N7U6 833 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 OR13C4Q8NGS5 318 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 C1orf216Q8TAB5 229 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 BRSK1Q8TDC3 778 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 LRRC8CQ8TDW0 803 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 SORCS1Q8WY21 1168 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 GATA6Q92908 595 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 VPS39Q96JC1 886 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 DNAJC1Q96KC8 554 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 RMDN2Q96LZ7 410 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TBATAQ96M53 351 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 RANBP9Q96S59 729 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TBC1D10AQ9BXI6 508 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 IQCGQ9H095 443 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 VPS11Q9H270 941 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 SFXN1Q9H9B4 322 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 FBXO6Q9NRD1 293 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 SNX15Q9NRS6 342 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 DUS2Q9NX74 493 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 NDUFA13Q9P0J0 144 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TBC1D14Q9P2M4 693 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 SLCO3A1Q9UIG8 710 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 SLC39A10Q9ULF5 831 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 FNDC3AQ9Y2H6 1198 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 PLLPQ9Y342 182 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 REV3LO60673 3130 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 KRBA1A5PL33 1030 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 CCDC22O60826 627 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 HAUS5O94927 633 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PAPSS2O95340 614 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 GLP2RO95838 553 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PABPC1P11940 636 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 ARSAP15289 507 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 CTPS1P17812 591 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 CES1P23141 567 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 CCNFP41002 786 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ETV4P43268 484 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PLK1P53350 603 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 EPHB1P54762 984 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 HYAL1Q12794 435 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 DHCR24Q15392 516 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TLR1Q15399 786 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PDK4Q16654 411 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ZNF789Q5FWF6 425 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 SH2D4BQ5SQS7 431 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TMEM215Q68D42 235 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 CGB2Q6NT52 195 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 CNSTQ6PJW8 725 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 GLT6D1Q7Z4J2 308 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ADIPOR2Q86V24 386 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 MFSD6LQ8IWD5 586 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ALDH16A1Q8IZ83 802 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ARHGAP24Q8N264 748 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 KIF2BQ8N4N8 673 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 PPFIBP2Q8ND30 876 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 MDGA1Q8NFP4 955 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 B4GALNT2Q8NHY0 566 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 TIFAQ96CG3 184 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 SLC7A6OSQ96CW6 309 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 MRPL38Q96DV4 380 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 ASIC4Q96FT7 647 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 FAM167BQ9BTA0 163 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 MCMBPQ9BTE3 642 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 MECRQ9BV79 373 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ADGRE3Q9BY15 652 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 LMAN2LQ9H0V9 348 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 EPB41L1Q9H4G0 881 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 EBF3Q9H4W6 596 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 SLCO1B3Q9NPD5 702 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 ZNF358Q9NW07 568 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 MARCH4Q9P2E8 410 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 STX18Q9P2W9 335 aaKnown RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 NKX1-2Q9UD57 310 aaPredicted RBP6.94□□□□□ -1.3
RTN4-205ENST00000394609 FBXO5Q9UKT4 447 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 COMMD3-BMI1R4GMX3 469 aa6.94□□□□□ -1.3
RTN4-205ENST00000394609 BPTFQ12830 3046 aa6.93□□□□□ -1.3
RTN4-205ENST00000394609 A0A096LPK6 155 aa6.93□□□□□ -1.3
RTN4-205ENST00000394609 CCDC162PA2VCL2 907 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms