RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CCNCP24863 283 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 HADHAP40939 763 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 GRIA3P42263 894 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 CLK3P49761 638 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 GATMP50440 423 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TRAF3Q13114 568 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PLCL1Q15111 1095 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TPSAB1Q15661 275 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PCID2Q5JVF3 399 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 UBAP2Q5T6F2 1119 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 RNASEH2BQ5TBB1 312 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 FBXO46Q6PJ61 603 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 UGT2A3Q6UWM9 527 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 CES3Q6UWW8 571 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 DNAJC14Q6Y2X3 702 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 KCTD8Q6ZWB6 473 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 ARCQ7LC44 396 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 KCNMB4Q86W47 210 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TDRPQ86YL5 185 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 CLIP4Q8N3C7 705 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 ZNF557Q8N988 423 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 GOLM1Q8NBJ4 401 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 ZNF784Q8NCA9 323 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 NCLNQ969V3 563 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 SGF29Q96ES7 293 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PRR11Q96HE9 360 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 DMRTB1Q96MA1 342 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 C7orf26Q96N11 449 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 ZNF717Q9BY31 904 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 OSBPL2Q9H1P3 480 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 EXOSC4Q9NPD3 245 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 PIGVQ9NUD9 493 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 NENFQ9UMX5 172 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 SCML2Q9UQR0 700 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PCDHA11Q9Y5I1 949 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 N6AMT1Q9Y5N5 214 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PDE4DIPQ5VU43 2346 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 GREB1LQ9C091 1923 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 IRAK2O43187 625 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TBL1XO60907 577 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 KCNH1O95259 989 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 GLP2RO95838 553 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 APOA4P06727 396 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PFKMP08237 780 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 MAGEA11P43364 429 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 HCAR3P49019 387 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 NME5P56597 212 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 YBEYP58557 167 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 FPGSQ05932 587 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 RUNX1T1Q06455 604 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 ZIK1Q3SY52 487 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 AGKQ53H12 422 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 FAM26DQ5JW98 314 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PLPP4Q5VZY2 271 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PAOXQ6QHF9 649 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 PAGE2Q7Z2X7 111 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TTC30BQ8N4P2 665 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 VPS33AQ96AX1 596 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TMIGD2Q96BF3 282 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TCF12Q99081 682 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 CGREF1Q99674 301 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 EBF4Q9BQW3 602 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 UNKQ9C0B0 810 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 ZNF696Q9H7X3 374 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 DTLQ9NZJ0 730 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 EBF1Q9UH73 591 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 MSRAQ9UJ68 235 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 INSL6Q9Y581 213 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 SNX10Q9Y5X0 201 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 CLUHO75153 1309 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ARPC4-TTLL3A0A0A6YYG9 625 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PNMA8CA0A1B0GUJ8 204 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 KRBA1A5PL33 1030 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TRIM38O00635 465 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 GABRDO14764 452 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 INPP4BO15327 924 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ACSL4O60488 711 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 NOS1APO75052 506 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 CLDN11O75508 207 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TIPRLO75663 272 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 FGF19O95750 216 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CYP11A1P05108 521 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ATXN8OSP0DMR3 200 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 MLNP12872 115 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TACR2P21452 398 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PCSK6P29122 969 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 SLC18A1P54219 525 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PRKAA2P54646 552 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 KLF10Q13118 480 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 MSLNQ13421 630 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 TSTA3Q13630 321 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 FAM83EQ2M2I3 478 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TPGS1Q6ZTW0 290 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 MMAAQ8IVH4 418 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PARP8Q8N3A8 854 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ASCC1Q8N9N2 400 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 HJURPQ8NCD3 748 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 MARK4Q96L34 752 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 SEPHS2Q99611 448 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms