RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SOWAHCQ53LP3 525 aaPredicted RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 C12orf60Q5U649 245 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 IL31Q6EBC2 164 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 GLYATQ6IB77 296 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 BRAT1Q6PJG6 821 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 ABI1Q8IZP0 508 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 ZFAND1Q8TCF1 268 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 TOP1MTQ969P6 601 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 SLC45A3Q96JT2 553 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 FEM1AQ9BSK4 669 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 C1QTNF6Q9BXI9 259 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 RNF167Q9H6Y7 350 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 DIABLOQ9NR28 239 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 HSPBP1Q9NZL4 362 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 TMEM181Q9P2C4 612 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 H3BQ06 376 aaPredicted RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 BTN3A3O00478 584 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 BET1O15155 118 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 KCNN4O15554 427 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 PPM1BO75688 479 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 IFNA16P05015 189 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 C2P06681 752 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 TAL1P17542 331 aaPredicted RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 CHRM3P20309 590 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 SAT1P21673 171 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 GLRBP48167 497 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 GTF2A2P52657 109 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 ERVK-21P61565 698 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 CD47Q08722 323 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 PTPRRQ15256 657 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 SYT16Q17RD7 645 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 TYW3Q6IPR3 259 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 CORO6Q6QEF8 472 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 STK32CQ86UX6 486 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 HS3ST5Q8IZT8 346 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 YIPF7Q8N8F6 280 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 CNIH3Q8TBE1 160 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 DUS3LQ96G46 650 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 NECTIN3Q9NQS3 549 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 SLC9A2Q9UBY0 812 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 TRMT6Q9UJA5 497 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 TBC1D24Q9ULP9 559 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 INVSQ9Y283 1065 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF175Q9Y473 711 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 G3V2L1 256 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 H0Y626 953 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 NME4O00746 187 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 TRDMT1O14717 391 aaKnown RBP12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 TRIM13O60858 407 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 SOAT2O75908 522 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 GRIA4P48058 902 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 SERPINB9P50453 376 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 PRSS42Q7Z5A4 293 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 METTL23Q86XA0 190 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 TAGAPQ8N103 731 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 BEST2Q8NFU1 509 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 U3KQV3 271 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 TRAV6A0A075B6T7 132 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 WDR27A2RRH5 827 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 HMX3A6NHT5 357 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 LRRC72A6NJI9 287 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 EFCAB9A8MZ26 197 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 NDUFB10O96000 172 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 CSF2P04141 144 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 KRT19P08727 400 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 HOXD4P09016 255 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 ADORA3P0DMS8 318 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 STMN1P16949 149 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 PLIN5Q00G26 463 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 ROR1Q01973 937 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 STARD3Q14849 445 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 VARS2Q5ST30 1063 aaKnown RBP12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 LAIR2Q6ISS4 152 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 VTI1AQ96AJ9 217 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 C12orf57Q99622 126 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 NUP188Q5SRE5 1749 aa12.49□□□□□ -0.41
SLC28A1-203ENST00000394573 CYP3A7-CYP3A51PA0A087WV96 503 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 A0A1W2PRG6 482 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 C3orf70A6NLC5 250 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 PROZP22891 400 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 CYP3A7P24462 503 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 SHMT1P34896 483 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 RFC2P35250 354 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 GRK3P35626 688 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 SLC15A1P46059 708 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 NR2C2P49116 596 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 NOMO3P69849 1222 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 TEKQ02763 1124 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms