RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TGM6O95932 706 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 TXNP10599 105 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 GRIA4P48058 902 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 MANFP55145 182 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 GPR139Q6DWJ6 353 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 ELMO1Q92556 727 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 SSX3Q99909 188 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 SPHKAPQ2M3C7 1700 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 LARGE1O95461 756 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 CD83Q01151 205 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 PDK4Q16654 411 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 AHSA2Q719I0 299 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 UBR7Q8N806 425 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 ITGA10O75578 1167 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 MBL2P11226 248 aaPredicted RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 BAG6P46379 1132 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 EPHB3P54753 998 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 E2F1Q01094 437 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 USP30Q70CQ3 517 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 ACBD4Q8NC06 268 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 PCDHGA11Q9Y5H2 935 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 AZGP1P25311 298 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 MCAMP43121 646 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 COLEC12Q5KU26 742 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 APTXQ7Z2E3 356 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 GLS2Q9UI32 602 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 S100A10P60903 97 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 PTPRKQ15262 1439 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 QRICH1Q2TAL8 776 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 CCDC58Q4VC31 144 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 TLE2Q04725 743 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 CNDP2Q96KP4 475 aaKnown RBP13.38□□□□□ -0.27
USP49-203ENST00000394253 ZYG11BQ9C0D3 744 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 DNPEPQ9ULA0 475 aa13.38□□□□□ -0.27
USP49-203ENST00000394253 TACSTD2P09758 323 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 MYBP10242 640 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 VAMP1P23763 118 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 BMPR2Q13873 1038 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 GNASQ5JWF2 1037 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 ZNF550Q7Z398 422 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 WDSUB1Q8N9V3 476 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 ZBTB8BQ8NAP8 495 aaPredicted RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 M0R233 179 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 SCGB1D2O95969 90 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 IFNA1P01562 189 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 VDRP11473 427 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 RANBP3LQ86VV4 465 aaPredicted RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 PCDH20Q8N6Y1 951 aaKnown RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 ZNF512BQ96KM6 892 aaPredicted RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 COLEC11Q9BWP8 271 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 LOC100509620A0A075B734 347 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 MAPK3P27361 379 aaPredicted RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 AKT2P31751 481 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 KLK7P49862 253 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 USP4Q13107 963 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 ALX1Q15699 326 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 CLPTM1LQ96KA5 538 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 PAX3P23760 479 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 FGL1Q08830 312 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 MTX3Q5HYI7 312 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 TTI2Q6NXR4 508 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 TAPT1Q6NXT6 567 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 TBC1D15Q8TC07 691 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 DNAJB3Q8WWF6 145 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 AUTS2Q8WXX7 1259 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 MAT2BQ9NZL9 334 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 DOPEY2Q9Y3R5 2298 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 SLC30A8Q8IWU4 369 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 NSMCE3Q96MG7 304 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 SLC39A3Q9BRY0 314 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 SEMA4BQ9NPR2 832 aaPredicted RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 AKAP6Q13023 2319 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 MIA3Q5JRA6 1907 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 FXYD6-FXYD2A0A087WZ82 144 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 H3BQF6 201 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 GMFGO60234 142 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 FGBP02675 491 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 BCL2A1Q16548 175 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 PITRM1Q5JRX3 1037 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 TRAPPC5Q8IUR0 188 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 B3GNT4Q9C0J1 378 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 FXYD6Q9H0Q3 95 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 CD93Q9NPY3 652 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 MTRRQ9UBK8 725 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 VILLO15195 856 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 VLDLRP98155 873 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 SLC9B1Q4ZJI4 515 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 SPOCD1Q6ZMY3 1216 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 MIB1Q86YT6 1006 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 ACSF2Q96CM8 615 aaPredicted RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 MALSU1Q96EH3 234 aa13.37□□□□□ -0.27
USP49-203ENST00000394253 PNO1Q9NRX1 252 aaKnown RBP13.37□□□□□ -0.27
USP49-203ENST00000394253 TP53BP1Q12888 1972 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms