RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 NFKBIL1Q9UBC1 381 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-204ENST00000393546 MOSPD1Q9UJG1 213 aa18.9■□□□□ 0.62
PDLIM7-204ENST00000393546 PNMA8BQ9ULN7 279 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-204ENST00000393546 PKP3Q9Y446 797 aa18.9■□□□□ 0.62
PDLIM7-204ENST00000393546 DGKBQ9Y6T7 804 aa18.9■□□□□ 0.62
PDLIM7-204ENST00000393546 GOLGA6L10A0A0M3HER8 536 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 SCAMP1O15126 338 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 INPP4BO15327 924 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 STX7O15400 261 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 PPFIA2O75334 1257 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 LDOC1O95751 146 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 LPOP22079 712 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 TAF1AQ15573 450 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 PRRT3Q5FWE3 981 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 ALS2CLQ60I27 953 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 RBFAQ8N0V3 343 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 FSTL5Q8N475 847 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 TRAM1L1Q8N609 369 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 GLIS1Q8NBF1 620 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 OR1E3Q8WZA6 343 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 PLEKHG4BQ96PX9 1271 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 CAAP1Q9H8G2 361 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 CYP4F12Q9HCS2 524 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 IL17CQ9P0M4 197 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 FTSJ1Q9UET6 329 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 SAR1BQ9Y6B6 198 aa18.89■□□□□ 0.61
PDLIM7-204ENST00000393546 DNAH14Q0VDD8 3507 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 CRTAMO95727 393 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 CEACAM5P06731 702 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 COILP38432 576 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 SIM1P81133 766 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 PDE1BQ01064 536 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 C1orf61Q13536 156 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 SEMA5AQ13591 1074 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 ELOCQ15369 112 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 CYP1B1Q16678 543 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 PDPK2PQ6A1A2 396 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 ERMP1Q7Z2K6 904 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 C17orf53Q8N3J3 647 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 OR4C6Q8NH72 309 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 BAHD1Q8TBE0 780 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 COX14Q96I36 57 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 DUSP23Q9BVJ7 150 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 FRMD8Q9BZ67 464 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 FGF22Q9HCT0 170 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 MRPL40Q9NQ50 206 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 NLGN3Q9NZ94 848 aa18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 ARID1BQ8NFD5 2236 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-204ENST00000393546 SPAARA0A1B0GVQ0 90 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 PRSS38A1L453 326 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 FADS2P1A8MWK0 482 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 FFAR2O15552 330 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 TNFSF14O43557 240 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 BUD23O43709 281 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 ASMTLO95671 621 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 GAS8O95995 478 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 SPAM1P38567 509 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 MSLNQ13421 630 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 TTC27Q6P3X3 843 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 CCDC137Q6PK04 289 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 DOK6Q6PKX4 331 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 PPP1R21Q6ZMI0 780 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 GLRX5Q86SX6 157 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 SDR16C5Q8N3Y7 309 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 DNAAF3Q8N9W5 541 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 PDXPQ96GD0 296 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 CNDP2Q96KP4 475 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 LRRC61Q9BV99 259 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 CNOT6Q9ULM6 557 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 DOLKQ9UPQ8 538 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 SLC17A4Q9Y2C5 497 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 TMEM98Q9Y2Y6 226 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 ARL5AQ9Y689 179 aa18.87■□□□□ 0.61
PDLIM7-204ENST00000393546 LMO7DNF2Z398 122 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 TRIM38O00635 465 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 TPP1O14773 563 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 SIGLEC6O43699 453 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 PHF2O75151 1096 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 SUN1O94901 812 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 IVLP07476 585 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 APRTP07741 180 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 ANXA6P08133 673 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 GIMD1P0DJR0 217 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 TPH1P17752 444 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 POLD2P49005 469 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 CDH17Q12864 832 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 NYAP1Q6ZVC0 841 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 TRIM74Q86UV6 250 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 GKN2Q86XP6 184 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 OR4K2Q8NGD2 314 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 OR52K1Q8NGK4 314 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 DTX3LQ8TDB6 740 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 GRK7Q8WTQ7 553 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 SCG3Q8WXD2 468 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 CAPZA3Q96KX2 299 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 CLPBQ9H078 707 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 CARS2Q9HA77 564 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 IL26Q9NPH9 171 aa18.86■□□□□ 0.61
PDLIM7-204ENST00000393546 YY2O15391 372 aa18.85■□□□□ 0.61
PDLIM7-204ENST00000393546 SLC25A14O95258 325 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms