RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 FBXL22Q6P050 247 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 BLOC1S3Q6QNY0 202 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 CXCL17Q6UXB2 119 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 OR13C4Q8NGS5 318 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 MYRFLQ96LU7 910 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 TUBA8Q9NY65 449 aaPredicted RBP18.78■□□□□ 0.6
CBX1-202ENST00000393408 PCDHB8Q9UN66 801 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 BTRCQ9Y297 605 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 PCDHA9Q9Y5H5 950 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 A0A1B0GTL3 188 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 ARPC2O15144 300 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 FGF1P05230 155 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 GFAPP14136 432 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 IDO1P14902 403 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 HLA-DPA1P20036 260 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 FASP25445 335 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 RPL10P27635 214 aaKnown RBP18.78■□□□□ 0.6
CBX1-202ENST00000393408 OXTRP30559 389 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 GPR15P49685 360 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 ATP6AP1Q15904 470 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 SPATS1Q496A3 300 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 CMTR2Q8IYT2 770 aaKnown RBP18.78■□□□□ 0.6
CBX1-202ENST00000393408 RNF217Q8TC41 542 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 ADI1Q9BV57 179 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 CATSPERZQ9NTU4 200 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 OGNP20774 298 aaKnown RBP18.77■□□□□ 0.6
CBX1-202ENST00000393408 EMP3P54852 163 aa18.77■□□□□ 0.6
CBX1-202ENST00000393408 LCP2Q13094 533 aa18.77■□□□□ 0.6
CBX1-202ENST00000393408 DCTN2Q13561 401 aaKnown RBP18.77■□□□□ 0.6
CBX1-202ENST00000393408 GBF1Q92538 1859 aa18.77■□□□□ 0.6
CBX1-202ENST00000393408 CENPNQ96H22 339 aaPredicted RBP18.77■□□□□ 0.6
CBX1-202ENST00000393408 LIN28AQ9H9Z2 209 aaKnown RBP18.77■□□□□ 0.6
CBX1-202ENST00000393408 GPR45Q9Y5Y3 372 aa18.77■□□□□ 0.6
CBX1-202ENST00000393408 MUSKO15146 869 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 KPNA6O60684 536 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 KERAO60938 352 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 IGHA2P01877 340 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 EEF1DP29692 281 aaKnown RBP18.76■□□□□ 0.59
CBX1-202ENST00000393408 PBX3P40426 434 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 RANBP1P43487 201 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 CCT8P50990 548 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 STC1P52823 247 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 CLCQ05315 142 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 EFEMP1Q12805 493 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 SERINC3Q13530 473 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 POLD3Q15054 466 aaPredicted RBP18.76■□□□□ 0.59
CBX1-202ENST00000393408 RPS6KA2Q15349 733 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 DDR2Q16832 855 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 GNASQ5JWF2 1037 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 RAP1GAP2Q684P5 730 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 DCP1BQ8IZD4 617 aaKnown RBP18.76■□□□□ 0.59
CBX1-202ENST00000393408 ATP6V0D2Q8N8Y2 350 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 OR4L1Q8NH43 312 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 BRSK1Q8TDC3 778 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 KIAA1191Q96A73 305 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TMEM125Q96AQ2 219 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 C9orf16Q9BUW7 83 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 POLR1EQ9GZS1 481 aaKnown RBP18.76■□□□□ 0.59
CBX1-202ENST00000393408 GMIPQ9P107 970 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 CIDEBQ9UHD4 219 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 PTBP2Q9UKA9 531 aaKnown RBP18.76■□□□□ 0.59
CBX1-202ENST00000393408 CLEC11AQ9Y240 323 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 A0A087WXM4 84 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TRIM64A6NGJ6 449 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TPST1O60507 370 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 RAMP2O60895 175 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 VPS4BO75351 444 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 MERTKQ12866 999 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 GALNT3Q14435 633 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TYSND1Q2T9J0 566 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 OGFOD2Q6N063 350 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TTC33Q6PID6 262 aaPredicted RBP18.76■□□□□ 0.59
CBX1-202ENST00000393408 SPRED1Q7Z699 444 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TRPV3Q8NET8 790 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TNIP2Q8NFZ5 429 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 BTN2A3PQ96KV6 586 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 BIRC8Q96P09 236 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TRIM54Q9BYV2 358 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 TRIM8Q9BZR9 551 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 GALNT8Q9NY28 637 aa18.76■□□□□ 0.59
CBX1-202ENST00000393408 ZFC3H1O60293 1989 aaKnown RBP18.76■□□□□ 0.59
CBX1-202ENST00000393408 EPOP01588 193 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 GPIP06744 558 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 PIRTP0C851 137 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 PRR35P0CG20 571 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 AKR1A1P14550 325 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 APLP1P51693 650 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 DIO3P55073 304 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 PARP15Q460N3 678 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 SLC36A3Q495N2 470 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 CIR1Q86X95 450 aaPredicted RBP18.75■□□□□ 0.59
CBX1-202ENST00000393408 ZNF786Q8N393 782 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 ADAMTS16Q8TE57 1224 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 TSPEARQ8WU66 669 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 ADAM2Q99965 735 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 DERL2Q9GZP9 239 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 FBXO44Q9H4M3 255 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 IKZF3Q9UKT9 509 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 RIMKLBQ9ULI2 386 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 A0A1W2PP18 115 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms