RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FAM20AQ96MK3 541 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SEC22CQ9BRL7 303 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 GINS4Q9BRT9 223 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 RUSC1Q9BVN2 902 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SLC6A17Q9H1V8 727 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CHST12Q9NRB3 414 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 NPAP1Q9NZP6 1156 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CYB5R1Q9UHQ9 305 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 RIMKLBQ9ULI2 386 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 MEIOCA2RUB1 952 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF98A6NK75 572 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SLC9A3R1O14745 358 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-201ENST00000393077 B4GAT1O43505 415 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 APOC3P02656 99 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CHRNA1P02708 482 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF37AP17032 561 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-201ENST00000393077 NAGAP17050 411 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CD9P21926 228 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 RPA4Q13156 261 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 MTMR1Q13613 665 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 POU4F3Q15319 338 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 STXBP2Q15833 593 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SYT16Q17RD7 645 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 GPAT3Q53EU6 434 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 C10orf62Q5T681 223 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CDHR3Q6ZTQ4 885 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 FAM92BQ6ZTR7 304 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 TRIM69Q86WT6 500 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF276Q8N554 614 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 OR8K5Q8NH50 307 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CNDP2Q96KP4 475 aaKnown RBP7.61□□□□□ -1.19
VTI1A-201ENST00000393077 OR52B2Q96RD2 323 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 MNTQ99583 582 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 APOL5Q9BWW9 433 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 POLMQ9NP87 494 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-201ENST00000393077 CCNB1IP1Q9NPC3 277 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 SNX15Q9NRS6 342 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 ACSL5Q9ULC5 683 aa7.61□□□□□ -1.19
VTI1A-201ENST00000393077 RGS10O43665 173 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TCF4P15884 667 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 HLA-FP30511 346 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 HTR7P34969 479 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 RGS7P49802 495 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 NAGLUP54802 743 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 BCAR1P56945 870 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 POLR2GP62487 172 aaKnown RBP eCLIP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 GTF2H3Q13889 308 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CBWD6Q4V339 395 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 PITRM1Q5JRX3 1037 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CBWD3Q5JTY5 395 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CBWD5Q5RIA9 395 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 FNDC5Q8NAU1 212 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 WDR36Q8NI36 951 aaKnown RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 NDNFQ8TB73 568 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TTC9Q92623 222 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 MYDGFQ969H8 173 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ACCSQ96QU6 501 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 GAL3ST1Q99999 423 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 KATNAL1Q9BW62 490 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 SPRTNQ9H040 489 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 IMPAD1Q9NX62 359 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 SAE1Q9UBE0 346 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 FAM198AQ9UFP1 575 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 IPO11Q9UI26 975 aaKnown RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 GLS2Q9UI32 602 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 VPS9D1Q9Y2B5 631 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 RAP2CQ9Y3L5 183 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TCAF1Q9Y4C2 921 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 AFG3L2Q9Y4W6 797 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ANKRD12Q6UB98 2062 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 SCN11AQ9UI33 1791 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 PIPSLA2A3N6 862 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 LRRC72A6NJI9 287 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CDK1P06493 297 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 DHRS4L1P0CG22 281 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 PRKAR1AP10644 381 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ETV4P43268 484 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 GLRBP48167 497 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 SSTP61278 116 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 DSG2Q14126 1118 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ATP13A4Q4VNC1 1196 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ANKRD22Q5VYY1 191 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ALKBH2Q6NS38 261 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 PNCKQ6P2M8 343 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TMEM270Q6UE05 265 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 BBS12Q6ZW61 710 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 HIPK1Q86Z02 1210 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 EID3Q8N140 333 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 BEND7Q8N7W2 519 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ANKFN1Q8N957 763 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TMEM102Q8N9M5 508 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 OR10Z1Q8NGY1 313 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 POF1BQ8WVV4 589 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 KLHL6Q8WZ60 621 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ST8SIA4Q92187 359 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 SEMA4DQ92854 862 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 DNAJC19Q96DA6 116 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 MCEEQ96PE7 176 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TWNKQ96RR1 684 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms